Predicted Glycosyltransferases

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-195   GLY-196  3.1 2.9 -29.0 53.7 145.2 146.1 16.9
 GLY-196   ALA-197  0.9 1.2 -22.4 104.4 139.9 142.4 78.8
 ALA-197   ASP-198  1.2 1.9 -10.8 8.5 113.0 98.5 4.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-385   ALA-386  9.4 9.3 -5.5 9.6 126.0 128.6 7.0
 ALA-386   ARG-387  5.8 5.7 -25.0 12.2 115.0 120.7 -0.1
 ARG-387   THR-388  6.6 6.4 -24.7 -16.9 154.6 140.2 -35.9
 THR-388   PHE-389  8.1 9.2 -26.0 -1.1 127.5 136.3 -36.3
 PHE-389   SER-390  4.5 8.0 -138.8 92.1 88.1 109.3 306.4
 SER-390   TRP-391  4.3 4.5 -136.0 -28.7 144.2 156.5 -160.1
 TRP-391   ALA-392  3.4 3.6 14.6 19.1 52.2 48.9 24.8
 ALA-392   ALA-393  6.7 6.9 4.5 -47.6 56.3 57.4 -27.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees