Glutamate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-200
GLY-201
9.0
9.0
3.9
-3.6
127.1
129.1
-8.3
GLY-201
SER-202
6.8
7.0
-3.2
6.7
92.9
93.6
7.1
SER-202
LEU-203
3.1
3.3
-6.7
11.7
111.2
108.4
-17.7
LEU-203
VAL-204
1.7
2.1
-1.8
-3.3
33.6
27.4
64.2
VAL-204
ARG-205
4.5
4.7
-10.7
6.8
44.6
51.6
-12.5
ARG-205
PRO-206
5.7
5.7
-10.7
9.7
72.6
77.7
-22.2
PRO-206
GLU-207
9.2
9.3
-1.9
-3.3
60.9
60.1
58.1
GLU-207
ALA-208
9.4
9.4
8.2
-8.1
157.4
160.3
-26.9
ALA-208
THR-209
6.9
7.0
-3.1
-0.1
29.2
33.1
11.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-373
ALA-374
9.1
9.0
10.4
-0.7
106.9
104.1
-50.6
ALA-374
GLY-375
5.2
5.2
-2.1
-6.1
22.3
19.4
41.6
GLY-375
GLY-376
5.2
5.2
-2.0
-2.4
59.8
51.1
14.6
GLY-376
VAL-377
5.8
6.1
-3.6
-4.1
103.7
101.1
8.6
VAL-377
LEU-378
4.3
5.1
16.9
-12.8
112.6
101.6
-10.7
LEU-378
VAL-379
0.6
1.4
9.0
-6.4
160.2
165.9
10.1
VAL-379
SER-380
1.4
1.9
-3.9
6.8
82.2
78.8
-1.0
SER-380
GLY-381
4.8
5.3
-2.4
1.9
103.1
101.9
3.2
GLY-381
PHE-382
4.9
5.1
-4.8
4.3
40.5
40.6
-3.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TRP-393
THR-394
5.9
5.7
15.0
-10.3
58.8
57.9
40.9
THR-394
ALA-395
5.6
5.2
1.6
-0.1
131.4
129.9
8.0
ALA-395
GLU-396
5.1
4.9
1.7
-3.2
125.0
127.3
2.6
GLU-396
GLU-397
8.6
8.3
2.2
1.9
139.5
139.4
6.8
GLU-397
VAL-398
8.1
7.7
-10.8
2.3
42.3
44.4
4.3
VAL-398
ASP-399
5.0
4.5
2.6
-6.3
126.7
121.4
-1.3
ASP-399
SER-400
7.3
6.9
1.4
-6.0
128.3
126.9
68.9
SER-400
LYS-401
9.8
9.4
5.9
-0.8
146.6
146.7
-64.8
LYS-401
LEU-402
7.7
7.4
0.5
4.9
132.4
124.5
7.2
LEU-402
HIS-403
6.0
5.7
-6.2
0.8
56.1
56.6
31.9
HIS-403
GLN-404
9.7
9.3
3.1
-0.9
141.2
143.6
-24.1
GLN-404
VAL-405
10.3
10.0
3.2
2.6
141.1
139.4
-37.4
VAL-405
MET-406
7.2
6.8
-5.9
-5.9
56.4
59.3
53.6
MET-406
THR-407
7.7
7.5
6.3
-1.1
133.4
126.1
-12.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-430
ASN-431
5.0
5.1
0.7
-2.2
60.6
63.3
-40.9
ASN-431
ILE-432
3.8
4.0
11.3
-7.7
69.2
67.7
51.3
ILE-432
VAL-433
1.9
1.8
-1.7
3.2
48.4
47.5
-23.4
VAL-433
GLY-434
2.8
2.5
-8.6
8.7
64.9
67.2
47.6
GLY-434
PHE-435
1.3
1.2
3.8
-4.4
50.5
49.7
11.0
PHE-435
GLN-436
3.2
3.2
4.7
-2.4
77.6
81.5
47.3
GLN-436
LYS-437
4.5
4.6
2.8
-3.6
125.3
126.7
-9.4
LYS-437
ILE-438
6.6
6.6
-5.5
5.6
97.0
97.8
-10.0
ILE-438
ALA-439
7.9
7.7
3.1
-1.6
31.6
31.7
3.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees