Pyrimidine Nucleoside Phosphorylase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-1065
GLY-1066
15.4
15.7
12.2
-16.8
44.0
51.8
-32.8
GLY-1066
GLU-1067
13.2
13.4
-18.9
34.5
132.7
136.7
51.4
GLU-1067
MET-1068
10.4
10.8
19.5
-24.1
106.8
110.0
4.4
MET-1068
LEU-1069
6.8
7.2
1.2
0.1
41.9
53.7
15.3
LEU-1069
ASP-1070
4.5
4.7
-16.1
15.5
106.2
116.6
8.0
ASP-1070
LEU-1071
1.5
2.2
4.2
-15.1
76.9
85.2
-6.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-1150
ILE-1151
13.1
13.3
-2.1
-0.7
84.3
80.9
4.8
ILE-1151
GLY-1152
13.6
13.6
-10.9
38.7
132.9
128.4
82.5
GLY-1152
GLN-1153
14.1
14.2
-8.6
6.0
63.3
74.4
-16.8
GLN-1153
THR-1154
13.2
11.9
-106.6
-130.1
67.3
54.8
-404.8
THR-1154
GLY-1155
16.0
13.5
115.8
93.7
160.0
84.3
573.5
GLY-1155
ASP-1156
15.2
15.3
-166.5
-51.9
58.9
81.1
-239.4
ASP-1156
LEU-1157
14.3
14.0
-27.8
19.9
117.8
110.8
-26.5
LEU-1157
THR-1158
11.4
11.0
14.4
-2.1
24.0
31.9
68.9
THR-1158
PRO-1159
12.1
12.1
11.0
-4.4
70.9
66.7
10.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-1191
GLY-1192
4.2
3.7
24.7
-5.1
44.2
48.3
74.6
GLY-1192
ALA-1193
0.9
0.7
-20.4
16.1
83.7
82.3
0.7
ALA-1193
ASP-1194
3.2
2.9
-2.4
-1.4
77.2
83.4
0.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-1215
ARG-1216
5.7
6.2
-6.4
0.4
61.9
58.2
14.4
ARG-1216
LEU-1217
6.5
7.1
5.7
1.2
145.4
145.1
-25.2
LEU-1217
ALA-1218
4.1
4.4
-11.7
2.4
40.5
40.9
38.2
ALA-1218
ARG-1219
4.3
4.8
2.2
-2.3
117.8
115.3
19.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-1220
MET-1221
7.7
8.5
5.9
7.0
27.8
31.1
65.0
MET-1221
VAL-1222
4.9
5.6
0.9
-0.8
53.1
52.6
13.6
VAL-1222
ASP-1223
6.7
7.6
-7.0
12.0
117.7
116.0
17.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees