Glutamate Receptor, Ionotropic Kainate 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 THR-520   LEU-521  5.0 5.6 -22.1 13.8 128.4 123.4 -9.7
 LEU-521   GLY-522  1.5 2.4 29.3 -39.6 128.3 124.8 24.0
 GLY-522   ILE-523  2.3 2.0 22.9 -6.1 52.6 50.8 38.9
 ILE-523   SER-524  5.6 5.4 7.0 -6.9 69.9 67.0 18.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ILE-744   ASP-745  8.1 8.0 -23.0 14.8 136.7 144.0 -35.2
 ASP-745   SER-746  4.8 4.9 1.9 8.5 110.5 102.0 14.0
 SER-746   LYS-747  1.7 1.8 2.6 4.2 67.4 80.4 26.2
 LYS-747   GLY-748  2.2 2.1 -12.5 -9.2 47.6 53.0 50.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LYS-782   TRP-783  12.3 12.1 -4.8 3.7 105.4 106.3 7.8
 TRP-783   TRP-784  9.4 9.2 6.7 -7.3 86.8 90.2 -22.4
 TRP-784   ARG-785  6.6 6.4 -157.4 12.9 141.4 133.4 -408.7
 ARG-785   GLY-786  6.4 8.1 155.4 -179.6 87.9 30.0 25.9
 GLY-786   ASN-787  8.0 6.2 34.2 -47.2 54.0 43.8 821.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees