S-Adenosylhomocysteine Hydrolase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-184   LYS-185  0.2 0.3 35.6 -39.9 107.0 115.0 10.8
 LYS-185   SER-186  3.6 3.5 -4.4 0.4 102.9 110.2 2.9
 SER-186   LYS-187  5.1 5.5 -5.1 -22.1 60.8 73.9 22.7
 LYS-187   PHE-188  5.1 5.8 49.1 -47.2 159.7 169.3 2.9
 PHE-188   ASP-189  5.0 5.1 -18.0 4.2 83.4 61.4 17.2
 ASP-189   ASN-190  7.7 6.7 -19.9 37.1 112.0 112.8 42.0
 ASN-190   LEU-191  9.8 9.5 19.4 -16.8 110.5 100.1 -2.4
 LEU-191   TYR-192  10.1 10.3 16.0 -16.3 169.8 162.5 1.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-354   PHE-355  5.5 5.5 -15.5 6.9 48.9 51.0 40.3
 PHE-355   VAL-356  2.5 2.5 -10.9 -2.3 15.8 9.2 67.5
 VAL-356   MET-357  4.4 4.1 7.8 -10.1 99.0 107.8 29.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-385   PRO-386  8.7 9.0 2.2 17.8 70.8 77.1 2.1
 PRO-386   LYS-387  9.9 9.9 -20.1 12.1 58.3 71.3 -13.1
 LYS-387   LYS-388  8.1 7.6 1.6 -4.1 139.0 138.1 -18.4
 LYS-388   LEU-389  11.2 10.5 -22.8 19.6 33.9 27.5 29.5
 LEU-389   ASP-390  10.1 9.9 1.4 8.4 109.4 105.1 -1.7
 ASP-390   GLU-391  6.3 6.2 -17.7 11.2 58.2 56.4 40.6
 GLU-391   ALA-392  8.1 7.4 9.8 -5.0 152.0 155.7 -27.4
 ALA-392   VAL-393  9.8 9.0 10.3 4.7 134.4 135.6 -59.0
 VAL-393   ALA-394  6.8 5.8 -6.6 -10.2 71.5 66.3 58.3
 ALA-394   GLU-395  5.9 5.4 12.3 -9.4 133.4 124.3 -23.2
 GLU-395   ALA-396  9.3 8.9 7.3 -20.5 156.8 155.4 63.4
 ALA-396   HIS-397  8.4 8.2 26.0 -27.3 128.4 129.1 -6.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees