Spike Glycoprotein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-317
PHE-318
13.0
17.2
87.9
43.4
96.2
73.5
6.6
PHE-318
ARG-319
13.9
18.6
96.4
-80.6
95.4
154.1
66.3
ARG-319
VAL-320
17.3
17.9
-130.9
64.2
96.4
100.2
42.9
VAL-320
GLN-321
20.3
19.5
-4.6
-12.4
45.5
71.2
24.2
GLN-321
PRO-322
22.5
17.8
-19.4
-11.4
73.1
59.9
45.4
PRO-322
THR-323
25.5
19.0
-23.4
-17.6
119.2
117.8
-34.2
THR-323
GLU-324
29.1
21.5
171.2
-62.7
127.3
125.9
-115.0
GLU-324
SER-325
32.4
22.4
-20.4
27.8
48.2
42.5
-1.4
SER-325
ILE-326
33.5
21.2
-58.7
-54.9
71.1
44.3
108.9
ILE-326
VAL-327
36.5
22.8
-21.6
-42.3
62.9
41.0
49.3
VAL-327
ARG-328
38.5
22.2
94.4
-48.1
158.7
138.1
-67.1
ARG-328
PHE-329
37.4
23.6
-7.1
9.6
92.5
38.8
9.4
PHE-329
PRO-330
36.7
23.1
20.7
2.7
151.5
135.5
-8.7
PRO-330
ASN-331
35.2
24.7
-149.6
-106.3
58.9
86.8
-58.6
ASN-331
ILE-332
37.3
27.8
70.4
13.0
179.6
147.4
-121.4
ILE-332
THR-333
36.0
27.3
17.5
23.7
103.8
89.0
-26.3
THR-333
ASN-334
34.1
30.2
178.1
31.2
172.1
101.4
168.2
ASN-334
LEU-335
33.0
29.4
-39.0
69.1
79.5
127.3
17.8
LEU-335
CYS-336
32.2
29.3
-22.5
97.6
36.3
52.1
-69.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-526
PRO-527
24.4
21.0
57.6
21.3
67.3
109.8
-2.2
PRO-527
LYS-528
27.8
24.4
-43.6
75.7
37.1
36.2
-27.5
LYS-528
LYS-529
28.7
23.5
-34.8
81.3
52.1
99.4
3.9
LYS-529
SER-530
31.0
26.3
-48.7
-149.8
29.6
74.2
259.6
SER-530
THR-531
32.4
26.2
109.2
-97.7
138.8
144.5
-31.5
THR-531
ASN-532
31.0
27.6
35.7
67.9
127.6
80.0
-71.2
ASN-532
LEU-533
31.2
29.3
-34.6
25.6
27.7
76.1
-9.5
LEU-533
VAL-534
29.9
27.9
-132.8
33.6
107.4
24.2
117.7
VAL-534
LYS-535
28.7
27.8
1.0
-2.5
71.5
75.7
-1.7
LYS-535
ASN-536
30.4
28.6
79.9
-111.6
69.6
144.4
11.3
ASN-536
LYS-537
29.1
28.8
-157.7
-74.3
37.9
33.2
-166.9
LYS-537
CYS-538
27.7
26.1
-12.7
-15.1
87.6
103.0
13.8
CYS-538
VAL-539
24.2
22.4
138.1
-66.6
48.3
85.8
62.1
VAL-539
ASN-540
22.8
21.1
11.6
-126.6
35.0
61.2
-150.3
ASN-540
PHE-541
20.7
18.2
72.9
-68.7
69.4
35.9
10.8
PHE-541
ASN-542
22.0
19.0
-139.7
-8.5
135.6
129.9
213.1
ASN-542
PHE-543
18.9
17.8
26.9
-31.2
107.5
33.3
-16.5
PHE-543
ASN-544
15.8
18.6
69.4
-142.7
52.0
53.9
-35.8
ASN-544
GLY-545
14.1
17.2
-141.8
19.9
67.3
68.5
43.6
GLY-545
LEU-546
13.2
14.5
-71.3
-45.5
55.1
75.3
-371.9
LEU-546
THR-547
10.0
13.3
-61.1
-152.8
13.7
25.3
321.6
THR-547
GLY-548
10.4
13.7
163.4
122.3
105.1
109.8
19.1
GLY-548
THR-549
14.0
14.4
40.5
37.5
143.2
144.2
-104.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees