Benzoylformate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-452   MET-453  3.1 3.1 3.7 -2.1 77.8 76.4 -36.2
 MET-453   ASN-454  0.7 0.6 4.0 3.6 43.2 44.2 86.5
 ASN-454   ASN-455  2.7 2.8 -4.9 5.2 115.2 117.3 73.2
 ASN-455   GLY-456  4.4 4.4 -3.6 6.5 146.1 145.1 45.0
 GLY-456   THR-457  5.2 5.3 -4.8 -1.9 155.0 154.8 -168.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-474   GLY-475  3.8 4.0 0.8 3.1 37.0 37.3 146.9
 GLY-475   LEU-476  4.5 4.6 -3.6 -0.9 138.7 140.5 -84.6
 LEU-476   ASP-477  2.1 2.3 -1.9 6.7 151.6 152.1 73.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees