Extracellular Solute-Binding Protein, Family 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-83   ASN-84  8.8 8.8 -1.3 -1.6 117.8 117.6 41.9
 ASN-84   ASN-85  8.9 8.9 2.3 -0.2 106.3 107.6 -7.5
 ASN-85   LYS-86  6.8 6.7 -0.6 1.5 105.0 105.7 -48.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-87   PRO-88  4.2 4.2 -0.4 3.4 59.6 58.7 -21.8
 PRO-88   ALA-89  3.8 3.7 -1.3 -1.2 53.5 54.9 -32.6
 ALA-89   ASN-90  7.1 7.0 0.7 -1.1 159.2 159.8 92.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-102   LYS-103  8.1 8.1 1.8 -0.3 25.5 25.2 3.7
 LYS-103   ARG-104  6.5 6.5 0.1 0.3 56.7 55.7 82.8
 ARG-104   ALA-105  8.1 8.1 -0.1 0.3 128.4 128.5 14.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-200   TYR-201  14.7 14.6 -1.5 2.3 60.9 62.7 -24.5
 TYR-201   LEU-202  17.3 17.2 -2.2 2.4 89.9 90.9 -6.1
 LEU-202   ALA-203  18.6 18.6 0.2 -4.2 21.7 20.9 -58.7
 ALA-203   ARG-204  18.7 18.6 2.4 0.5 80.5 78.7 92.7
 ARG-204   LEU-205  20.6 20.5 -1.8 -0.5 72.1 73.1 9.3
 LEU-205   LYS-206  23.3 23.2 2.4 0.7 52.4 52.9 -83.0
 LYS-206   ARG-207  23.6 23.4 -10.8 12.1 148.0 148.3 276.8
 ARG-207   SER-208  24.3 23.8 2.5 -17.7 100.6 96.0 471.5
 SER-208   SER-209  26.6 26.3 -10.3 -6.3 112.3 106.7 -68.2
 SER-209   LYS-210  30.2 29.9 4.0 12.5 138.5 143.1 -807.0
 LYS-210   PRO-211  31.4 31.2 -0.8 3.7 78.4 63.8 -17.9
 PRO-211   GLU-212  32.5 32.5 1.3 -7.2 151.0 153.3 139.9
 GLU-212   ASP-213  31.5 31.3 2.9 -4.9 88.5 87.8 -119.5
 ASP-213   GLN-214  27.9 27.7 0.8 2.9 70.2 75.6 -96.5
 GLN-214   ALA-215  28.2 28.2 -4.3 1.6 42.9 36.0 -90.9
 ALA-215   VAL-216  29.7 29.7 1.0 -5.4 128.6 126.0 184.7
 VAL-216   ALA-217  26.5 26.4 1.0 -0.1 61.6 63.5 -137.5
 ALA-217   ASP-218  24.3 24.3 1.7 4.4 88.6 91.5 -39.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-234   ASN-235  3.1 3.1 0.6 -2.3 93.1 92.5 65.4
 ASN-235   ILE-236  4.8 4.8 -0.5 2.8 147.1 147.0 74.4
 ILE-236   SER-237  7.2 7.2 -0.5 1.2 88.0 87.4 -110.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-273   TYR-274  11.7 11.7 0.2 0.2 134.7 135.9 52.9
 TYR-274   PRO-275  9.0 9.1 -0.3 1.7 55.0 54.2 -85.2
 PRO-275   VAL-276  7.0 7.0 1.9 -2.8 67.4 66.7 4.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-283   SER-284  15.2 15.3 -1.6 4.9 78.3 80.4 -65.5
 SER-284   VAL-285  18.5 18.6 -3.1 -0.5 15.3 15.5 173.0
 VAL-285   LEU-286  19.2 19.3 3.0 -2.0 123.2 123.0 -76.8
 LEU-286   LYS-287  16.0 16.1 0.7 -0.4 77.2 77.7 -17.8
 LYS-287   PRO-288  17.0 17.1 -0.4 -3.9 50.2 50.0 96.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-297   ASN-298  5.9 5.8 -0.9 0.6 121.2 120.8 -16.1
 ASN-298   VAL-299  6.7 6.7 -0.7 0.1 54.8 55.0 41.1
 VAL-299   SER-300  5.6 5.6 -0.1 -0.6 67.3 67.1 26.2
 SER-300   VAL-301  9.4 9.4 1.1 -3.0 164.0 163.4 -10.6
 VAL-301   TYR-302  8.6 8.6 1.1 -6.5 126.4 127.1 528.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees