5'-Nucleotidase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-352   GLN-353  12.5 12.5 4.2 2.3 58.2 58.6 11.1
 GLN-353   ASN-354  12.1 11.9 0.7 4.1 105.6 108.1 11.9
 ASN-354   LYS-355  9.4 9.0 3.3 -11.4 79.4 72.9 -18.9
 LYS-355   GLY-356  7.2 7.5 14.1 -5.0 14.7 13.5 14.0
 GLY-356   LYS-357  7.6 7.8 8.7 -2.5 68.8 77.6 17.9
 LYS-357   ALA-358  7.2 6.5 3.3 3.1 103.1 104.9 0.2
 ALA-358   GLN-359  4.3 3.2 -1.4 3.7 119.7 134.8 -8.8
 GLN-359   LEU-360  2.5 3.6 9.8 27.4 20.3 35.6 71.1
 LEU-360   GLU-361  3.0 2.5 -21.5 -4.7 102.4 89.1 -22.5
 GLU-361   VAL-362  3.9 1.8 5.6 -8.1 87.2 88.5 15.9
 VAL-362   LYS-363  2.9 3.1 1.3 7.2 21.3 25.1 10.5
 LYS-363   ILE-364  5.5 5.8 -6.0 2.7 113.5 123.6 -6.4
 ILE-364   GLY-365  5.4 5.8 -1.6 11.6 135.4 135.9 12.7
 GLY-365   GLU-366  7.9 7.9 -6.5 -3.7 94.8 83.6 12.7
 GLU-366   THR-367  10.0 10.2 -19.4 11.9 166.6 164.6 -15.4

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees