Smg-7 Transcript Variant 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ALA-178   ALA-179  1.9 1.9 -4.1 -3.4 26.9 22.6 50.0  ALA-179   GLN-180  4.6 4.4 -8.5 4.9 41.8 45.9 35.6  GLN-180   LEU-181  4.6 4.5 21.9 -19.1 117.6 114.0 -44.5 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees