Binding Protein Component Of Abc Sugar Transporter

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-141   ILE-142  5.7 5.9 11.0 -4.6 63.0 67.7 24.0
 ILE-142   HIS-143  3.0 3.4 -7.5 2.4 77.7 82.8 8.4
 HIS-143   ARG-144  6.2 6.5 -7.9 5.2 95.8 100.5 11.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-300   ASN-301  5.0 5.0 0.5 -1.9 132.4 133.2 0.1
 ASN-301   ILE-302  4.5 4.8 16.0 -4.8 62.9 61.8 45.5
 ILE-302   ASP-303  3.1 3.8 -2.1 9.3 62.1 65.4 -18.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-336   GLN-337  9.0 10.0 -5.6 -1.3 45.8 52.7 -5.3
 GLN-337   ASN-338  10.6 11.6 11.3 2.5 64.8 61.1 -6.0
 ASN-338   LYS-339  13.9 14.7 -52.6 62.4 158.0 149.9 65.7
 LYS-339   GLY-340  12.5 12.9 -6.7 14.4 89.0 92.3 -16.6
 GLY-340   SER-341  10.7 11.6 -18.5 1.8 112.2 97.8 -31.5
 SER-341   LEU-342  7.3 8.0 -5.3 10.0 46.0 42.7 -27.8
 LEU-342   PRO-343  3.9 4.7 4.0 3.1 75.5 76.5 16.9
 PRO-343   VAL-344  4.1 4.9 -6.2 -1.3 116.7 121.6 -29.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-354   ALA-355  9.6 10.1 4.6 -12.0 83.7 83.0 -3.9
 ALA-355   CYS-356  10.6 10.5 7.0 4.7 31.2 22.1 66.7
 CYS-356   THR-357  11.0 11.3 -3.4 -3.7 110.7 116.3 -11.5
 THR-357   GLN-358  7.5 7.9 -1.8 0.7 63.8 67.2 6.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees