Shikimate 5-Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-101
PRO-102
2.6
2.6
1.0
-2.8
69.2
69.0
2.2
PRO-102
GLY-103
4.7
5.0
0.8
-0.5
28.4
26.4
9.6
GLY-103
PHE-104
3.0
3.5
-5.1
6.4
83.9
84.5
-2.6
PHE-104
LEU-105
1.7
1.9
-8.1
8.2
79.5
78.7
14.6
LEU-105
GLU-106
5.0
5.2
-9.2
-0.5
143.7
139.3
-54.5
GLU-106
ALA-107
6.4
7.0
14.1
-4.2
51.3
44.8
67.6
ALA-107
LEU-108
5.1
5.6
-7.2
0.7
71.9
77.7
12.2
LEU-108
LYS-109
7.7
8.2
-8.7
12.9
105.8
101.2
31.9
LYS-109
ALA-110
10.2
10.7
-18.4
6.4
168.7
165.8
-84.1
ALA-110
GLY-111
9.5
10.4
-16.9
37.4
105.4
113.7
31.9
GLY-111
GLY-112
10.6
10.4
-22.1
37.8
65.2
79.2
-14.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-229
PRO-230
4.3
4.2
-3.8
7.9
109.7
108.6
33.4
PRO-230
MET-231
3.2
3.5
-1.7
2.5
133.8
133.1
-3.5
MET-231
LEU-232
1.4
1.4
-1.9
-2.9
65.2
66.5
5.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees