Acriflavine Resistance Protein B

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-131   SER-132  24.7 24.3 36.6 60.7 61.4 71.6 142.1
 SER-132   SER-133  21.4 22.3 -34.9 -83.1 139.1 138.3 -566.2
 SER-133   SER-134  19.7 19.3 -10.0 -35.4 62.8 90.3 53.7
 SER-134   SER-135  19.0 16.2 11.9 4.3 89.3 77.8 5.9
 SER-135   PHE-136  15.4 14.0 -31.7 -24.3 58.7 39.1 188.0
 PHE-136   LEU-137  12.4 11.7 7.2 7.6 52.4 60.1 55.7
 LEU-137   MET-138  11.8 11.5 0.2 -4.4 96.4 99.0 -17.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-180   GLN-181  10.0 10.3 18.6 1.1 44.4 49.3 28.0
 GLN-181   TYR-182  9.2 9.2 15.0 10.5 34.2 50.0 115.6
 TYR-182   ALA-183  8.4 8.4 5.3 3.9 59.2 67.1 16.8
 ALA-183   MET-184  11.2 11.4 -10.1 -0.2 145.9 145.3 -40.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-280   PHE-281  7.7 8.3 2.9 -9.1 37.6 34.4 -7.4
 PHE-281   ASN-282  5.8 6.6 0.3 -4.7 72.4 84.9 9.4
 ASN-282   GLY-283  8.6 9.7 2.0 -3.1 132.5 144.9 10.3
 GLY-283   GLN-284  11.0 11.5 1.8 3.0 159.5 153.7 -38.6
 GLN-284   PRO-285  9.2 9.0 -11.9 -5.4 63.4 76.7 29.6
 PRO-285   ALA-286  7.2 7.0 5.6 8.2 71.1 69.8 48.4
 ALA-286   SER-287  3.9 3.9 -13.6 1.3 71.3 76.6 27.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-331   PHE-332  8.7 9.2 0.8 -0.8 164.9 155.5 2.7
 PHE-332   VAL-333  7.6 7.7 -14.2 3.1 63.3 66.0 33.5
 VAL-333   LYS-334  11.4 11.3 12.4 2.4 104.3 109.5 -27.5
 LYS-334   ILE-335  12.7 12.9 0.0 6.5 139.4 156.7 -23.2
 ILE-335   SER-336  10.4 10.7 0.6 9.8 155.5 136.4 -49.7
 SER-336   ILE-337  10.0 11.3 -3.3 -4.6 66.4 74.1 38.2
 ILE-337   HIS-338  13.8 15.0 -2.6 4.7 70.1 55.3 -12.3
 HIS-338   GLU-339  14.2 15.0 -9.2 0.2 31.0 20.9 42.5
 GLU-339   VAL-340  11.8 12.6 -4.6 -2.9 40.1 54.7 26.6
 VAL-340   VAL-341  13.6 14.9 0.7 -7.3 100.0 105.1 18.0
 VAL-341   LYS-342  16.8 18.0 1.8 -2.9 122.8 136.2 -14.2
 LYS-342   THR-343  15.6 16.5 -1.8 2.5 12.2 25.4 -6.4
 THR-343   LEU-344  14.4 15.2 -10.3 -4.7 64.8 65.5 55.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-989   VAL-990  8.4 7.4 10.9 2.0 75.3 72.7 41.8
 VAL-990   ILE-991  5.4 4.5 -20.9 -1.2 71.8 73.1 48.6
 ILE-991   SER-992  4.9 3.4 1.8 9.1 173.0 166.6 -39.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-995   GLY-996  5.0 3.7 3.6 4.1 130.9 121.9 -21.0
 GLY-996   SER-997  6.8 5.4 -11.3 5.6 11.9 10.9 30.1
 SER-997   GLY-998  4.9 3.6 -6.0 6.8 63.1 73.0 13.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees