Glutamate Receptor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  PHE-106   MET-107  9.6 9.6 -0.5 1.4 123.1 122.6 5.2  MET-107   SER-108  7.4 7.4 1.6 0.7 19.3 18.6 97.3  SER-108   LEU-109  8.1 8.1 -1.0 2.1 123.2 124.3 87.6 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LEU-192   GLU-193  4.3 4.3 -0.6 -0.4 123.7 123.7 -38.4  GLU-193   SER-194  2.9 3.0 1.5 -0.9 72.6 72.4 12.1  SER-194   THR-195  1.2 1.1 -0.5 1.2 154.4 153.5 16.2 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LYS-204   PRO-205  16.9 16.8 1.6 -0.4 47.6 50.5 42.0  PRO-205   CYS-206  18.4 18.4 -0.9 0.5 113.9 116.8 36.8  CYS-206   ASP-207  16.3 16.2 0.8 3.1 8.8 7.3 118.6 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ASN-214   LEU-215  6.3 6.3 -2.2 0.5 43.6 44.5 62.0  LEU-215   ASP-216  6.7 6.8 -0.3 -1.4 107.8 107.5 -23.1  ASP-216   SER-217  9.2 9.3 1.4 0.5 17.1 15.4 66.9 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees