Hypothetical Shikimate 5-Dehydrogenase-Like Protein Hi0607

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-103   TYR-104  3.1 3.0 -0.2 -1.1 57.4 55.7 16.5
 TYR-104   ILE-105  0.9 0.8 0.1 2.3 62.7 64.3 0.3
 ILE-105   ALA-106  3.3 3.5 -3.2 2.1 139.8 139.0 15.3
 ALA-106   ILE-107  1.7 1.9 3.0 -2.4 105.7 106.7 18.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-235   ALA-236  8.1 8.0 -5.7 2.1 50.2 51.1 15.4
 ALA-236   ALA-237  6.3 6.2 -2.9 0.7 98.6 101.0 46.2
 ALA-237   VAL-238  3.8 3.9 -2.7 -0.1 144.2 142.5 -25.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees