Ovotransferrin (Monoferric N-Terminal Half-Molecule) 3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-81   TYR-82  7.7 7.3 -0.7 5.6 101.1 103.5 3.9
 TYR-82   GLU-83  5.5 5.9 14.5 -14.6 40.1 39.6 3.0
 GLU-83   HIS-84  4.4 4.8 -167.8 46.0 74.3 79.8 48.3
 HIS-84   THR-85  1.5 4.0 -176.8 -56.5 146.4 66.2 110.8
 THR-85   GLU-86  3.5 0.5 53.3 131.2 52.6 53.0 -251.1
 GLU-86   GLY-87  2.7 1.5 24.1 0.7 87.8 96.8 -12.6
 GLY-87   SER-88  1.7 5.2 52.7 71.5 149.2 154.1 -224.2
 SER-88   THR-89  3.3 5.3 0.8 68.1 139.8 130.1 616.9
 THR-89   THR-90  3.7 6.1 -100.8 -32.2 41.6 43.2 -445.7
 THR-90   SER-91  5.4 2.6 102.5 64.1 143.0 86.7 203.4
 SER-91   TYR-92  2.4 2.8 136.4 -26.9 75.7 83.3 71.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-245   ARG-246  5.9 6.2 -16.9 39.2 39.7 39.5 -33.6
 ARG-246   VAL-247  3.3 4.2 16.5 12.1 62.4 62.5 37.3
 VAL-247   ALA-248  0.7 0.9 -45.3 -2.9 53.1 45.7 60.1
 ALA-248   ALA-249  4.1 4.0 21.1 -8.2 102.3 103.3 7.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees