F1-Atpase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-131   VAL-132  12.3 11.1 -2.8 -40.0 54.6 84.5 87.0
 VAL-132   GLU-133  8.7 7.7 -8.2 4.4 91.8 93.7 -9.3
 GLU-133   ILE-134  9.2 8.5 14.7 -11.8 125.2 107.7 1.9
 ILE-134   LEU-135  7.3 7.3 -0.8 -13.2 41.3 32.1 46.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-172   HIS-173  10.1 9.9 -14.5 11.9 88.0 85.6 4.5
 HIS-173   ASN-174  13.9 13.7 1.0 -10.0 145.5 147.2 23.5
 ASN-174   ILE-175  14.4 13.9 26.3 -62.8 95.2 104.2 35.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-325   ASP-326  6.5 6.3 28.7 -0.9 26.2 23.2 92.2
 ASP-326   ALA-327  3.8 3.9 -20.8 30.5 104.6 106.5 1.6
 ALA-327   THR-328  3.9 3.4 -16.2 -3.3 44.2 51.1 56.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees