Atp-Dependent Molecular Chaperone Hsp82

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-480   ALA-481  9.8 9.5 -23.9 1.2 39.2 51.2 20.3
 ALA-481   VAL-482  8.6 7.5 -96.1 121.7 89.8 101.4 119.6
 VAL-482   GLU-483  5.3 5.5 10.1 -33.0 15.8 41.8 -138.6
 GLU-483   LYS-484  5.7 3.7 55.2 16.4 68.3 106.5 30.3
 LYS-484   SER-485  4.7 3.4 -22.6 21.5 42.4 54.2 -39.4
 SER-485   PRO-486  3.8 0.2 20.2 -6.1 87.2 69.9 56.6
 PRO-486   PHE-487  4.0 3.7 -35.4 -23.5 35.9 99.0 70.7
 PHE-487   LEU-488  2.2 4.9 40.9 51.3 68.5 20.1 405.6
 LEU-488   ASP-489  3.7 4.4 -105.0 32.6 167.4 125.6 -324.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-495   PHE-496  10.1 10.3 4.6 17.2 69.5 69.9 65.6
 PHE-496   GLU-497  10.6 11.3 -68.7 80.0 91.1 96.9 -9.6
 GLU-497   VAL-498  9.4 10.2 -2.7 15.5 155.7 166.5 58.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-515   PHE-516  23.8 23.0 70.0 -11.9 45.9 43.8 205.4
 PHE-516   GLU-517  23.5 23.6 -163.2 173.6 143.2 122.9 -40.8
 GLU-517   GLY-518  25.7 24.7 -104.5 -155.4 86.7 59.0 -256.1
 GLY-518   LYS-519  25.8 22.5 -175.3 17.0 79.7 38.0 633.9
 LYS-519   THR-520  22.0 21.2 7.3 -7.0 154.1 78.8 1.3
 THR-520   LEU-521  20.0 18.1 -27.4 -30.4 96.8 43.3 -644.3
 LEU-521   VAL-522  16.9 15.1 10.8 85.1 127.0 86.4 358.4
 VAL-522   ASP-523  13.8 11.6 -9.3 38.2 106.3 93.2 162.2
 ASP-523   ILE-524  10.1 9.5 81.4 63.8 102.6 132.2 -419.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees