Fatty Oxidation Complex Alpha Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ALA-282   LYS-283  2.9 2.8 0.1 -0.5 68.6 68.9 8.3  LYS-283   THR-284  6.4 6.3 2.5 -17.2 90.4 92.2 24.3  THR-284   SER-285  7.1 6.9 -0.8 20.2 152.9 150.3 179.7  SER-285   ALA-286  9.6 9.0 -56.9 56.4 100.8 103.7 -101.6  ALA-286   SER-287  8.5 8.4 8.2 -2.9 68.2 65.3 26.9  SER-287   ASN-288  4.8 4.7 -4.5 4.7 171.8 175.3 2.3  ASN-288   CYS-289  4.5 4.7 -5.0 -0.1 123.5 123.0 -48.4  CYS-289   LEU-290  7.7 7.7 -6.1 5.9 99.7 96.2 -17.6  LEU-290   ILE-291  7.5 7.6 -0.8 0.3 130.2 127.7 -0.7  ILE-291   GLY-292  4.3 4.4 -4.3 -2.7 159.1 161.6 -87.4  ALA-282   LYS-283  31.9 32.1 0.1 -0.5 51.5 54.0 -20.9  LYS-283   THR-284  31.5 32.1 2.5 -17.2 48.6 43.2 -247.0  THR-284   SER-285  29.2 29.8 -0.8 20.2 87.2 81.9 109.5  SER-285   ALA-286  25.9 26.3 -56.9 56.4 72.8 64.3 120.4  ALA-286   SER-287  24.5 24.8 8.2 -2.9 175.0 174.6 -132.0  SER-287   ASN-288  26.1 26.4 -4.5 4.7 61.2 62.5 35.8  ASN-288   CYS-289  24.7 24.8 -5.0 -0.1 99.1 96.3 38.8  CYS-289   LEU-290  21.4 21.4 -6.1 5.9 47.2 48.8 28.8  LEU-290   ILE-291  21.3 21.4 -0.8 0.3 26.3 23.5 6.6  ILE-291   GLY-292  22.2 22.5 -4.3 -2.7 84.5 81.9 34.6  GLY-292   LEU-293  19.4 19.6 4.4 2.5 110.9 104.1 -2.5  ALA-282   LYS-283  2.9 2.8 0.1 -0.5 68.6 68.9 8.3  LYS-283   THR-284  6.4 6.3 2.5 -17.2 90.4 92.2 24.3  THR-284   SER-285  7.1 6.9 -0.8 20.2 152.9 150.3 179.7  SER-285   ALA-286  9.6 9.0 -56.9 56.4 100.8 103.7 -101.6  ALA-286   SER-287  8.5 8.4 8.2 -2.9 68.2 65.3 26.9  SER-287   ASN-288  4.8 4.7 -4.5 4.7 171.8 175.3 2.3  ASN-288   CYS-289  4.5 4.7 -5.0 -0.1 123.5 123.0 -48.4  CYS-289   LEU-290  7.7 7.7 -6.1 5.9 99.7 96.2 -17.6  LEU-290   ILE-291  7.5 7.6 -0.8 0.3 130.2 127.7 -0.7  ILE-291   GLY-292  4.3 4.4 -4.3 -2.7 159.1 161.6 -87.4  ALA-282   LYS-283  31.9 32.1 0.1 -0.5 51.5 54.0 -20.9  LYS-283   THR-284  31.5 32.1 2.5 -17.2 48.6 43.2 -247.0  THR-284   SER-285  29.2 29.8 -0.8 20.2 87.2 81.9 109.5  SER-285   ALA-286  25.9 26.3 -56.9 56.4 72.8 64.3 120.4  ALA-286   SER-287  24.5 24.8 8.2 -2.9 175.0 174.6 -132.0  SER-287   ASN-288  26.1 26.4 -4.5 4.7 61.2 62.5 35.8  ASN-288   CYS-289  24.7 24.8 -5.0 -0.1 99.1 96.3 38.8  CYS-289   LEU-290  21.4 21.4 -6.1 5.9 47.2 48.8 28.8  LEU-290   ILE-291  21.3 21.4 -0.8 0.3 26.3 23.5 6.6  ILE-291   GLY-292  22.2 22.5 -4.3 -2.7 84.5 81.9 34.6  GLY-292   LEU-293  19.4 19.6 4.4 2.5 110.9 104.1 -2.5  LEU-293   PHE-294  17.0 17.1 -14.1 -2.9 5.9 7.7 389.3  PHE-294   LEU-295  18.5 18.3 5.6 3.5 117.2 117.5 -83.9  LEU-295   ASN-296  17.7 18.4 17.8 -25.2 89.4 93.0 -56.9  ASN-296   ASP-297  14.2 14.7 2.3 5.7 132.5 128.7 -108.3  ASP-297   GLN-298  13.9 14.0 3.1 4.5 154.7 158.5 -164.3  GLN-298   GLU-299  14.8 14.9 -11.2 7.6 85.8 82.5 39.9  GLU-299   LEU-300  12.7 13.0 -1.1 6.9 81.2 85.5 15.0  LEU-300   LYS-301  9.6 9.8 -19.8 11.3 21.0 24.1 179.0  LYS-301   LYS-302  10.5 10.4 10.5 -3.7 131.2 133.9 -119.8  LYS-302   LYS-303  10.6 10.6 2.8 -1.3 85.4 88.1 0.1  LYS-303   ALA-304  7.6 7.6 -9.3 5.7 70.0 69.0 26.4  ALA-304   LYS-305  6.1 5.8 -5.5 4.5 13.6 8.5 20.5  LYS-305   VAL-306  6.5 6.6 -3.5 0.7 80.3 74.1 3.8  VAL-306   TYR-307  5.0 5.3 18.3 -6.7 90.9 90.4 -28.5  TYR-307   ASP-308  1.3 1.6 -14.8 12.4 39.8 36.6 23.8  ASP-308   LYS-309  2.7 2.8 -18.1 26.7 28.9 30.6 -143.5  LYS-309   ILE-310  1.2 1.7 -5.1 2.5 87.2 82.8 12.8  ILE-310   ALA-311  2.9 2.5 -22.2 33.7 119.7 116.2 128.7  ALA-311   LYS-312  4.2 3.6 24.9 -22.6 128.7 129.8 -62.7  LYS-312   ASP-313  7.5 7.2 16.6 -27.2 64.3 66.9 -59.8  ASP-313   VAL-314  9.6 9.7 -31.4 27.7 105.7 100.9 14.1  VAL-314   LYS-315  12.6 12.6 12.9 -8.3 107.8 107.4 -8.7 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  GLY-497   PHE-498  5.1 5.2 4.4 0.5 36.3 37.2 79.7  PHE-498   LEU-499  3.8 3.8 -7.3 2.0 79.1 77.3 38.0  LEU-499   VAL-500  0.3 0.3 1.8 1.0 134.3 134.6 -40.9 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees