Glutamate Receptor Ionotropic, Nmda 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-143
GLN-144
5.7
6.1
10.3
23.8
161.9
145.0
-436.1
GLN-144
GLY-145
6.6
8.1
-46.8
5.9
60.2
41.3
367.7
GLY-145
LEU-146
9.1
9.1
-15.7
-7.3
32.6
37.9
142.7
LEU-146
THR-147
9.9
9.6
8.5
-0.6
124.0
124.8
-4.7
THR-147
ILE-148
7.2
7.0
-3.0
7.4
32.2
33.0
4.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-242
GLU-243
6.2
6.1
0.6
-2.7
169.9
170.3
15.9
GLU-243
LEU-244
8.3
7.9
3.7
9.2
113.1
113.9
-9.6
LEU-244
PHE-245
8.0
7.6
-4.2
-3.6
86.7
89.3
13.9
PHE-245
PHE-246
11.6
11.2
-10.9
8.8
56.2
57.5
59.9
PHE-246
ARG-247
13.7
13.8
7.9
-31.9
134.8
145.2
67.2
ARG-247
SER-248
11.3
11.7
4.2
-4.4
139.3
152.6
3.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees