Atp-Dependent RNA Helicase Dob1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-633
GLY-634
14.1
13.3
11.2
18.7
96.9
105.6
-11.3
GLY-634
ILE-635
13.3
13.0
15.0
-7.3
92.7
79.8
30.0
ILE-635
GLU-636
9.6
9.4
-14.1
120.7
152.1
178.5
528.4
GLU-636
VAL-637
9.3
10.6
-169.8
5.6
121.8
114.9
-581.0
VAL-637
GLU-638
8.1
7.3
73.4
15.2
84.6
109.9
-134.7
GLU-638
ASP-639
4.5
4.3
58.2
28.2
39.7
32.4
335.8
ASP-639
GLU-640
5.1
4.5
-32.2
-2.9
128.6
143.1
-139.6
GLU-640
GLU-641
2.3
1.4
-35.9
51.6
92.3
80.9
82.4
GLU-641
ASN-642
1.8
2.5
-18.9
4.3
86.5
92.8
22.0
ASN-642
VAL-643
4.9
3.8
18.6
-22.7
160.8
154.8
22.5
VAL-643
LYS-644
4.1
4.1
25.8
-6.5
91.6
106.3
-35.5
LYS-644
GLU-645
5.8
6.2
-6.8
7.6
98.0
97.5
-0.6
GLU-645
TYR-646
8.5
8.8
0.6
-7.0
147.0
137.2
23.8
TYR-646
HIS-647
8.8
8.8
18.9
-18.5
132.9
150.4
1.6
HIS-647
GLU-648
8.7
8.6
4.3
-6.0
77.8
87.1
-23.5
GLU-648
ILE-649
11.6
11.8
-1.4
8.6
79.5
86.8
-7.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-851
LYS-852
0.5
1.1
-15.8
8.9
65.2
71.6
-7.0
LYS-852
TYR-853
2.9
2.2
4.6
-16.0
116.8
114.8
9.4
TYR-853
SER-854
2.5
2.9
6.3
-2.5
50.6
51.4
9.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees