Glucosamine 6-Phosphate Deaminase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-135   GLY-136  3.4 3.3 -4.7 -3.2 103.5 104.2 -23.7
 GLY-136   GLY-137  6.8 6.7 4.5 -1.1 11.7 17.3 46.7
 GLY-137   VAL-138  8.5 8.7 6.2 -10.6 93.3 98.0 64.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-154   SER-155  18.9 17.8 -4.5 3.3 104.2 91.6 18.9
 SER-155   ARG-156  18.6 18.3 9.0 -19.4 73.4 78.0 116.4
 ARG-156   THR-157  16.3 16.2 -11.3 13.5 62.9 66.0 42.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-199   MET-200  6.7 6.9 -7.6 6.5 161.8 162.2 -34.1
 MET-200   ILE-201  5.3 5.5 -0.5 2.0 121.9 123.1 36.3
 ILE-201   LEU-202  6.6 6.7 -5.5 13.6 158.4 158.6 115.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-234   ALA-235  11.8 11.8 5.9 -1.2 125.9 130.1 -63.3
 ALA-235   ILE-236  10.7 10.9 -0.6 -3.5 28.8 27.6 18.4
 ILE-236   MET-237  9.2 9.4 -6.1 12.2 54.5 50.3 -75.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-243   THR-244  10.6 10.4 -0.3 3.9 83.4 88.2 39.3
 THR-244   MET-245  12.6 12.6 7.1 1.0 47.9 52.9 128.4
 MET-245   GLU-246  14.5 14.8 -11.3 1.6 76.1 73.4 -10.7
 GLU-246   LEU-247  17.7 17.9 1.3 -1.6 122.1 116.3 -3.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees