Maltose/maltodextrin Transport Atp-Binding Protein Malk

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-79   VAL-80  5.0 4.8 1.2 -11.2 55.6 54.6 -109.9
 VAL-80   PHE-81  7.4 7.5 49.9 -45.9 74.7 77.8 -9.1
 PHE-81   GLN-82  10.8 10.6 -13.4 61.5 121.9 127.5 287.8
 GLN-82   SER-83  14.1 13.6 -43.8 -71.8 63.6 100.8 128.6
 SER-83   TYR-84  15.7 15.3 76.1 -116.7 78.9 135.8 84.4
 TYR-84   ALA-85  13.8 13.6 -60.5 74.7 35.5 90.8 -138.3
 ALA-85   LEU-86  13.8 16.3 105.4 -7.4 73.4 101.1 244.4
 LEU-86   TYR-87  16.3 16.4 71.2 -16.9 127.1 131.5 -433.3
 TYR-87   PRO-88  18.6 18.5 -4.7 21.6 121.5 118.6 -0.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-152   SER-153  4.1 4.6 -25.3 41.1 83.6 84.1 62.3
 SER-153   VAL-154  5.7 6.0 -15.7 -5.5 71.6 62.8 131.4
 VAL-154   PHE-155  4.0 4.4 3.0 4.7 114.9 110.7 -65.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-160   LEU-161  8.7 9.0 -11.8 9.4 158.4 149.4 -19.3
 LEU-161   SER-162  9.2 9.9 -10.1 28.6 113.7 103.4 -45.4
 SER-162   ASN-163  13.0 13.5 138.7 -125.3 76.2 63.3 107.7
 ASN-163   LEU-164  15.1 14.7 -73.6 75.7 41.2 12.6 -23.8
 ASN-163   LEU-164  15.1 14.7 -73.6 75.7 41.2 12.6 -23.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-163   LEU-164  15.1 14.7 -73.6 75.7 41.2 12.6 -23.8
 ASN-163   LEU-164  15.1 14.7 -73.6 75.7 41.2 12.6 -23.8
 LEU-164   ASP-165  12.7 12.8 -2.9 -37.2 29.2 47.5 342.2
 ASP-165   ALA-166  13.0 13.9 -8.7 8.8 80.9 51.2 -41.6
 ALA-166   ALA-167  11.1 12.3 153.7 172.6 104.4 130.4 141.4
 ALA-167   LEU-168  8.3 9.8 97.4 -114.2 39.3 55.9 -295.2
 LEU-168   ARG-169  8.0 8.8 -2.0 -7.3 133.4 135.9 -119.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-170   GLN-171  5.5 5.8 -0.5 -3.1 80.0 81.4 -20.4
 GLN-171   MET-172  3.1 3.7 -3.2 -5.9 13.0 15.3 103.8
 MET-172   ARG-173  3.4 4.0 2.2 -4.4 105.1 106.1 21.9
 ARG-173   ILE-174  3.6 4.0 8.0 -12.3 100.3 102.5 39.6
 ARG-173   ILE-174  3.6 4.0 8.0 -12.3 100.3 102.5 39.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-173   ILE-174  3.6 4.0 8.0 -12.3 100.3 102.5 39.6
 ARG-173   ILE-174  3.6 4.0 8.0 -12.3 100.3 102.5 39.6
 ILE-174   GLU-175  2.0 1.6 -5.3 7.0 133.1 127.4 20.6
 GLU-175   ILE-176  1.8 1.8 25.2 -7.8 29.3 29.0 166.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees