Chlorella Virus DNA Ligase-Adenylate

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-185   LYS-186  3.6 3.8 5.4 4.7 124.5 124.8 -3.4
 LYS-186   MET-187  2.3 2.3 -10.7 6.4 37.1 45.4 1.8
 MET-187   LYS-188  0.8 1.6 9.4 -10.0 135.4 142.0 8.2
 LYS-188   GLN-189  1.5 0.5 -76.5 3.7 27.4 44.5 31.9
 GLN-189   PHE-190  0.6 3.8 -113.4 -2.6 49.5 42.6 56.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees