Nad-Dependent Deacetylase Sirtuin-3, Mitochondrial

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-151   SER-152  9.7 9.6 7.3 8.4 70.8 73.8 38.8
 SER-152   GLY-153  6.6 6.6 -8.3 20.0 126.5 133.3 38.3
 GLY-153   ILE-154  5.2 5.2 -9.9 0.7 69.7 68.7 44.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-203   TYR-204  6.1 5.3 -21.1 20.2 83.7 87.8 33.9
 TYR-204   LYS-205  4.7 4.0 -0.6 -11.7 116.6 120.7 -13.7
 LYS-205   PRO-206  7.8 7.1 12.7 0.4 49.9 57.5 51.9
 PRO-206   ASN-207  8.8 8.4 -1.9 1.4 61.9 57.1 -0.7
 ASN-207   VAL-208  11.2 10.7 1.8 1.1 47.1 54.8 -3.1
 VAL-208   THR-209  14.6 14.2 -3.8 -4.7 157.9 158.9 -31.9
 THR-209   HIS-210  13.0 13.2 13.6 -5.8 53.2 52.1 34.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-245   GLU-246  2.2 2.5 5.5 4.0 38.9 37.0 50.9
 GLU-246   ALA-247  0.4 0.3 -5.8 -14.4 71.4 69.7 57.9
 ALA-247   HIS-248  3.7 3.2 9.5 -1.8 64.7 64.6 -20.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-297   LEU-298  11.5 11.0 -2.3 -14.5 64.8 57.9 45.4
 LEU-298   PRO-299  8.1 7.5 12.6 -7.0 78.6 64.5 13.3
 PRO-299   GLN-300  5.8 5.9 6.9 -3.6 23.9 30.3 28.3
 GLN-300   ARG-301  5.1 5.0 13.1 1.4 91.1 91.8 62.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees