Lysozyme (E.C.3.2.1.17)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-10   GLU-11  3.2 3.3 -8.8 5.0 73.8 74.2 -25.4
 GLU-11   GLY-12  0.7 0.7 2.7 10.4 61.7 62.2 73.3
 GLY-12   LEU-13  3.0 2.7 -11.4 1.5 47.9 49.2 93.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-71   ASP-72  5.2 5.2 14.3 -5.5 29.2 31.7 105.9
 ASP-72   ALA-73  6.5 6.4 2.7 3.1 59.6 61.6 -60.3
 ALA-73   ALA-74  4.0 3.9 -7.3 4.7 66.2 65.8 76.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees