Benzoylformate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-456   THR-457  6.8 6.8 -6.5 -1.8 34.0 36.0 251.4
 THR-457   TYR-458  3.9 3.8 -3.5 6.6 101.3 102.1 99.5
 TYR-458   GLY-459  0.2 0.2 3.3 -11.8 93.7 93.6 154.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-476   ASP-477  2.3 2.2 2.5 1.3 142.3 139.4 -64.9
 ASP-477   VAL-478  5.4 5.4 -1.7 -0.6 70.9 69.8 -2.8
 VAL-478   PRO-479  7.3 7.2 -6.0 9.4 54.3 55.4 -71.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees