S-Adenosyl-L-Homocysteine Hydrolase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-184   LYS-185  1.9 1.8 -27.0 24.1 105.1 105.3 18.0
 LYS-185   SER-186  4.7 4.3 18.6 8.3 97.5 101.5 3.0
 SER-186   LYS-187  7.6 6.6 -5.7 9.6 104.7 121.9 -20.4
 LYS-187   PHE-188  7.8 7.2 -26.4 38.4 169.8 158.6 81.3
 PHE-188   ASP-189  7.1 6.9 14.6 -10.9 61.6 84.8 26.3
 ASP-189   ASN-190  8.2 9.2 27.1 -29.0 102.6 110.6 16.0
 ASN-190   LEU-191  11.4 11.6 -37.5 18.1 99.2 113.2 -30.3
 LEU-191   TYR-192  12.0 12.0 -14.0 21.4 161.5 172.5 40.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-345   LEU-346  19.5 19.5 -5.0 8.0 61.5 61.9 -15.3
 LEU-346   GLY-347  19.3 19.9 4.8 -12.3 113.3 120.7 20.1
 GLY-347   CYS-348  23.1 23.5 -2.3 -0.1 34.0 35.8 12.7
 CYS-348   ALA-349  23.4 23.5 4.7 6.1 127.6 120.5 -25.9
 ALA-349   MET-350  19.9 19.9 10.1 -13.2 87.4 95.9 2.1
 MET-350   GLY-351  16.6 17.0 2.0 4.3 37.7 38.0 40.5
 GLY-351   HIS-352  15.2 15.6 36.4 -35.4 95.1 90.4 -9.1
 HIS-352   PRO-353  12.1 12.1 3.1 0.4 138.7 139.8 -8.2
 PRO-353   SER-354  9.6 9.4 13.3 -9.7 75.2 78.8 28.1
 SER-354   PHE-355  6.9 6.8 -8.9 7.7 115.9 129.8 18.1
 PHE-355   VAL-356  4.2 4.1 14.2 -0.2 3.6 14.1 71.5
 VAL-356   MET-357  5.6 6.0 -21.1 19.5 111.8 101.7 14.4
 MET-357   SER-358  6.5 6.9 -10.5 3.7 94.0 94.3 5.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-382   HIS-383  12.1 12.4 -30.3 25.3 83.9 86.7 39.9
 HIS-383   PHE-384  9.4 9.6 -7.2 27.4 138.3 138.5 95.9
 PHE-384   LEU-385  6.4 6.4 0.2 10.5 64.2 51.5 12.1
 LEU-385   PRO-386  6.6 6.6 -10.9 -0.2 74.7 72.8 -17.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-388   LEU-389  9.0 9.3 3.7 -3.5 144.8 144.0 -23.4
 LEU-389   ASP-390  7.7 8.0 6.2 -7.9 111.7 111.0 6.7
 ASP-390   GLU-391  4.0 4.4 0.7 -4.1 127.5 124.3 2.7
 GLU-391   ALA-392  6.5 6.7 3.6 -6.4 152.6 150.0 28.8
 ALA-392   VAL-393  7.6 8.0 3.2 -11.4 130.2 133.9 23.1
 VAL-393   ALA-394  4.2 4.9 15.4 2.6 117.1 111.2 -79.7
 ALA-394   GLU-395  4.3 4.7 6.8 -11.5 133.8 134.5 25.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees