Mvca

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-139   ARG-140  3.0 3.7 1.1 -23.6 145.0 141.1 28.7
 ARG-140   GLU-141  3.5 3.8 -19.9 8.6 72.6 59.7 -16.4
 GLU-141   ASP-142  2.8 1.5 -8.1 -12.5 32.6 22.0 38.9
 ASP-142   PRO-143  0.2 1.4 -0.8 -1.5 52.8 58.7 14.7
 PRO-143   PRO-144  3.2 2.5 -1.3 -3.8 37.7 30.7 4.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-238   PHE-239  7.7 7.2 7.6 29.5 56.7 55.8 54.2
 PHE-239   TRP-240  4.6 4.1 -38.6 -3.9 61.0 57.5 35.5
 TRP-240   ILE-241  2.1 2.0 2.0 -3.5 92.3 97.9 -0.2
 ILE-241   GLY-242  2.6 4.7 1.1 17.2 126.2 125.6 -11.5
 GLY-242   SER-243  4.3 6.4 3.5 2.5 65.0 59.0 9.8
 SER-243   HIS-244  6.8 8.2 29.4 -45.6 129.1 125.4 31.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees