M-Calpain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-88   ILE-89  23.1 24.4 -5.8 -26.5 88.7 99.7 -24.2
 ILE-89   GLY-90  25.3 27.2 4.2 123.7 77.3 50.4 146.0
 GLY-90   GLY-91  24.2 26.8 -126.1 9.6 131.7 103.0 -501.8
 GLY-91   ALA-92  25.6 23.1 133.6 -8.4 21.3 66.9 403.7
 ALA-92   THR-93  24.2 20.4 -44.0 -6.7 128.7 147.4 -122.3
 THR-93   ARG-94  23.8 20.1 169.8 99.9 42.9 44.3 -221.4
 ARG-94   THR-95  22.6 19.0 152.1 68.6 121.2 67.8 215.7
 THR-95   ASP-96  22.0 22.7 -174.3 44.2 127.9 59.1 95.4
 ASP-96   ILE-97  24.3 22.9 -22.4 -54.7 83.7 104.9 -3.4
 ILE-97   CYS-98  22.5 20.9 -63.1 49.5 149.3 148.7 -58.7
 CYS-98   GLN-99  23.6 23.3 -54.3 42.3 70.6 89.3 35.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-105   TRP-106  18.9 17.0 -3.8 -11.8 74.3 75.3 12.3
 TRP-106   LEU-107  15.4 13.5 -26.3 4.3 25.9 20.2 85.0
 LEU-107   LEU-108  16.4 14.1 -7.3 -10.5 93.9 84.8 13.7
 LEU-108   ALA-109  17.2 16.1 16.1 -9.7 91.5 113.4 -0.3
 LEU-108   ALA-109  17.2 16.1 16.1 -9.7 91.5 113.4 -0.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-108   ALA-109  17.2 16.1 16.1 -9.7 91.5 113.4 -0.3
 LEU-108   ALA-109  17.2 16.1 16.1 -9.7 91.5 113.4 -0.3
 ALA-109   ALA-110  13.7 13.7 17.3 -3.3 32.1 50.1 44.3
 ALA-110   ILE-111  11.9 11.0 -3.6 11.3 138.7 140.4 4.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-209   GLY-210  3.4 4.1 -53.1 34.7 121.4 115.3 -46.6
 GLY-210   ILE-211  1.2 3.0 -5.5 42.2 136.2 151.0 113.6
 ILE-211   ALA-212  3.0 4.6 -1.2 22.6 149.1 130.0 42.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees