Phosphoenolpyruvate Carboxykinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-208   ASN-209  7.0 5.7 -11.4 11.8 156.3 158.1 -4.1
 ASN-209   VAL-210  7.1 5.8 1.6 0.9 57.0 52.5 29.5
 VAL-210   GLY-211  4.9 3.8 -1.3 -5.6 136.3 135.4 -31.0
 GLY-211   LYS-212  5.4 4.1 2.3 -0.2 22.3 23.9 10.1
 LYS-212   GLN-213  5.3 3.8 0.5 -1.9 78.7 80.0 10.0
 LYS-212   GLN-213  5.3 3.8 0.5 -1.9 78.7 80.0 10.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-212   GLN-213  5.3 3.8 0.5 -1.9 78.7 80.0 10.0
 LYS-212   GLN-213  5.3 3.8 0.5 -1.9 78.7 80.0 10.0
 GLN-213   GLY-214  2.8 2.1 3.0 -6.5 122.1 123.8 13.2
 GLY-214   ASP-215  0.8 1.1 6.3 0.4 156.6 153.4 -35.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-225   GLY-226  14.3 13.4 -33.1 -25.9 23.5 13.0 308.7
 GLY-226   LYS-227  14.2 14.6 26.4 6.6 127.6 126.0 -122.9
 LYS-227   THR-228  11.9 11.3 -16.8 22.1 35.8 34.0 -12.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-326   PRO-327  5.2 6.5 14.2 -26.4 97.7 97.6 39.2
 PRO-327   LYS-328  2.0 3.5 14.9 -28.0 81.7 92.6 22.6
 LYS-328   ASN-329  4.2 5.4 26.3 -8.8 135.0 122.1 -50.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-380   SER-381  6.0 5.5 -1.4 -9.7 57.5 63.3 30.2
 SER-381   CYS-382  3.2 2.5 5.2 1.0 167.0 156.5 -30.9
 CYS-382   PHE-383  2.5 2.4 1.5 1.1 114.7 118.0 -16.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-401   LYS-402  11.4 12.2 -7.6 -4.7 157.0 163.2 -70.3
 LYS-402   MET-403  9.1 10.3 16.7 1.2 63.4 64.5 72.8
 MET-403   GLN-404  7.8 8.7 -10.0 3.3 103.8 109.4 -26.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees