Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-107
SER-108
7.7
7.6
2.2
0.6
63.7
62.4
7.4
SER-108
LEU-109
4.2
4.1
1.2
-14.5
131.9
131.8
55.8
LEU-109
GLY-110
1.5
1.5
-3.1
14.5
119.6
118.6
30.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-194
THR-195
3.2
3.3
7.1
-8.6
54.4
55.7
21.0
THR-195
MET-196
3.5
3.8
-7.9
4.3
145.4
141.6
-49.7
MET-196
ASN-197
6.0
6.5
3.0
-2.4
51.8
48.5
31.4
ASN-197
GLU-198
4.9
5.4
-1.8
12.7
127.7
129.1
34.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-215
ASP-216
8.6
8.9
4.0
-2.5
152.7
151.9
-1.5
ASP-216
SER-217
5.9
6.1
-8.2
3.2
101.6
102.9
20.6
SER-217
LYS-218
2.1
2.3
21.3
-41.5
113.0
120.1
76.2
LYS-218
GLY-219
3.0
2.4
9.8
2.3
65.1
58.1
25.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees