Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-106
THR-107
7.1
6.8
-1.9
-16.7
30.5
29.5
98.5
THR-107
LEU-108
4.7
4.5
-9.1
2.8
104.1
102.3
-41.9
LEU-108
GLY-109
2.3
1.3
24.4
-29.8
148.7
140.5
20.8
GLY-109
ILE-110
3.7
3.4
6.5
-1.2
68.0
65.9
-9.8
ILE-110
SER-111
7.3
7.0
7.1
-7.4
87.2
85.3
-2.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-211
ASP-212
6.7
7.0
-15.3
1.5
114.5
122.3
-44.5
ASP-212
SER-213
4.2
4.4
2.3
7.5
122.4
121.1
-33.8
SER-213
LYS-214
2.5
2.4
23.8
-4.1
97.3
102.6
27.7
LYS-214
GLY-215
5.7
5.3
-23.0
8.3
27.7
43.6
64.1
GLY-215
TYR-216
7.5
7.2
-12.5
-7.6
57.8
57.6
27.2
TYR-216
GLY-217
9.8
9.6
2.1
-4.0
86.9
90.0
-0.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees