Nitrate/nitrite Response Regulator Protein Narl

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-162   ILE-163  8.1 7.8 -12.3 2.2 107.0 117.6 -82.8
 ILE-163   LEU-164  4.9 4.7 4.0 -0.6 47.7 48.2 11.9
 LEU-164   LYS-165  7.6 7.4 7.0 -5.8 22.6 28.8 32.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-187   LYS-188  1.5 1.5 0.1 -0.6 82.7 83.9 -13.3
 LYS-188   VAL-189  4.7 4.8 9.9 -8.3 44.6 42.1 8.1
 VAL-189   HIS-190  4.1 4.1 -1.9 6.7 74.2 72.4 37.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees