Glutaminyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-31   PRO-32  12.7 13.2 6.5 -15.8 108.3 103.8 -24.8
 PRO-32   PRO-33  12.4 12.5 -8.5 -13.2 64.7 56.2 99.6
 PRO-33   GLU-34  16.1 16.0 -91.1 90.4 55.3 79.3 76.2
 GLU-34   PRO-35  17.8 16.9 21.6 -11.4 64.3 68.5 93.6
 PRO-35   ASN-36  20.1 20.1 30.5 -0.3 132.8 131.7 -205.1
 ASN-36   GLY-37  22.1 22.3 35.6 -34.6 92.2 93.2 -2.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-64   PHE-65  11.2 11.5 1.7 8.3 131.1 133.1 -29.7
 PHE-65   ASP-66  14.3 14.4 -43.4 32.7 53.9 42.8 49.4
 ASP-66   ASP-67  14.2 13.1 -20.1 1.7 83.2 65.2 125.2
 ASP-67   THR-68  17.1 15.8 37.4 -40.9 123.1 124.8 37.9
 THR-68   ASN-69  15.9 15.0 38.8 -66.9 122.5 133.1 146.8
 ASN-69   PRO-70  19.0 18.2 -14.2 17.9 118.8 117.5 -33.8
 LYS-72   GLU-73  25.9 23.0 -59.3 -43.0 116.1 157.2 -770.0
 GLU-73   ASP-74  23.5 22.5 -172.1 163.2 104.9 128.0 68.8
 ASP-74   ILE-75  26.5 24.8 89.5 -17.0 39.8 24.0 648.1
 ILE-75   GLU-76  25.2 24.6 -124.5 116.7 103.6 108.6 -137.7
 GLU-76   TYR-77  26.2 26.8 8.9 -15.1 108.9 98.7 -20.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-97   TYR-98  10.5 10.9 8.0 -3.9 140.9 143.3 -26.2
 TYR-98   SER-99  12.4 12.5 18.2 -14.5 127.9 127.9 30.1
 SER-99   SER-100  11.2 11.2 5.6 -4.9 85.4 86.4 35.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-215   CYS-216  6.1 5.7 8.2 -4.6 106.3 106.4 -2.3
 CYS-216   ILE-217  2.3 2.0 -1.9 -2.1 44.1 43.7 31.9
 ILE-217   SER-218  3.9 3.7 7.2 -6.9 154.8 150.5 -21.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-236   ARG-237  5.2 5.6 9.7 -2.7 56.2 49.9 60.3
 ARG-237   ARG-238  5.1 5.4 4.5 -3.7 114.5 109.5 4.2
 ARG-238   LEU-239  3.7 3.8 9.3 -12.4 76.5 77.9 -22.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-250   VAL-251  8.7 8.9 56.6 -31.2 69.3 82.9 25.5
 VAL-251   HIS-252  7.0 6.8 6.7 -8.6 26.4 28.1 -16.0
 HIS-252   PRO-253  6.2 6.0 -1.0 2.2 91.4 83.0 -33.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees