Glutamate Receptor 3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-106   MET-107  9.3 9.1 2.1 -2.8 48.5 49.0 111.5
 MET-107   SER-108  5.8 5.6 0.6 7.2 125.3 121.1 -225.0
 SER-108   LEU-109  2.4 2.2 13.6 -13.7 54.1 51.1 68.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-196   ASN-197  6.3 6.2 -9.4 12.2 53.5 54.6 -137.1
 ASN-197   GLU-198  6.4 6.4 4.8 -6.9 127.3 124.0 128.0
 GLU-198   TYR-199  3.1 3.1 -3.3 6.3 41.1 39.1 -154.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-200   GLU-201  6.1 5.9 -7.6 7.4 121.6 120.7 -247.8
 GLU-201   GLN-202  5.3 5.2 -0.5 -8.4 136.3 138.5 -389.4
 GLN-202   ARG-203  2.0 2.1 15.6 -8.7 44.0 51.2 236.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-214   LEU-215  8.8 8.9 -4.5 4.0 147.5 144.1 -67.4
 LEU-215   ASP-216  10.5 10.8 -3.3 0.9 148.1 146.8 -93.2
 ASP-216   SER-217  7.5 7.8 11.5 2.2 105.3 104.4 -391.8
 SER-217   LYS-218  3.8 4.0 32.7 -28.2 64.8 70.0 409.1
 LYS-218   GLY-219  2.4 2.8 -19.6 18.9 53.5 54.2 -43.8
 GLY-219   TYR-220  4.1 4.2 -7.6 5.0 83.8 79.4 339.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-252   LYS-253  8.3 8.5 -1.0 -9.1 139.6 139.8 -436.1
 LYS-253   TRP-254  10.0 9.9 8.3 -5.1 74.8 75.3 -12.1
 TRP-254   TRP-255  8.1 8.1 -2.2 7.3 95.7 96.5 210.2
 TRP-255   TYR-256  4.4 4.4 -0.4 -0.6 136.1 141.1 50.0
 TYR-256   ASP-257  4.9 5.0 15.3 -27.1 37.8 33.6 -432.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees