Ump-Cmp Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-133   ARG-134  10.6 10.6 -15.4 3.3 77.3 88.7 28.0
 ARG-134   GLY-135  10.6 10.7 6.5 -4.3 67.0 61.1 20.9
 GLY-135   LYS-136  13.5 13.5 49.5 -24.1 127.0 121.6 -24.1
 LYS-136   SER-137  15.6 15.7 27.0 -57.7 144.0 112.3 87.4
 SER-137   SER-138  15.0 16.3 -22.9 85.5 92.8 122.6 166.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-155   LEU-156  3.1 3.2 -2.7 -3.2 90.9 63.3 2.2
 LEU-156   GLN-157  3.7 2.7 3.7 -24.9 157.6 152.0 60.9
 GLN-157   SER-158  3.9 3.1 0.6 -29.4 107.7 94.9 27.7
 SER-158   THR-159  5.6 6.1 -11.5 14.4 116.2 136.1 56.0
 THR-159   LYS-160  8.1 7.6 -24.5 -6.8 89.7 102.8 -33.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees