Calcium/calmodulin-Dependent Protein Kinase Type II Gamma Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-63   ILE-64  8.3 8.4 2.8 -6.5 140.6 144.1 39.0
 ILE-64   CYS-65  6.3 6.5 -3.8 4.3 106.2 103.2 40.3
 CYS-65   ARG-66  3.0 3.1 0.9 -1.6 68.4 63.5 -10.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-69   HIS-70  6.1 6.0 2.8 -9.5 37.7 39.8 -58.5
 HIS-70   PRO-71  7.0 6.9 -1.1 11.9 75.7 78.1 -28.7
 PRO-71   ASN-72  9.5 9.6 -15.4 4.1 107.6 101.3 37.7
 ASN-72   ILE-73  7.9 7.9 -0.8 4.9 73.9 71.6 -29.9
 ILE-73   VAL-74  5.0 5.0 -7.7 9.1 12.5 14.2 35.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-91   LEU-92  7.6 7.6 -1.0 1.5 85.7 87.7 -35.3
 LEU-92   VAL-93  10.8 10.8 11.0 -15.8 142.5 145.2 148.1
 VAL-93   THR-94  12.6 12.9 11.0 -5.9 84.5 78.9 26.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-154   LEU-155  9.0 9.0 4.8 -2.2 82.1 82.0 31.2
 LEU-155   ALA-156  6.7 6.6 -3.8 5.7 25.9 27.7 -13.3
 ALA-156   ASP-157  7.4 7.3 7.5 -10.0 82.2 81.0 -15.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-158   GLY-159  7.0 7.1 0.5 -3.1 69.3 71.3 -31.7
 GLY-159   LEU-160  10.4 10.6 3.3 -0.3 132.2 134.7 24.2
 LEU-160   ALA-161  11.7 11.8 -2.3 -2.0 59.5 59.7 25.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees