High Level Kasugamycin Resistance Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-137   PHE-138  6.0 6.3 4.9 -6.1 134.1 133.3 5.8
 PHE-138   MET-139  2.8 3.1 2.2 -3.0 123.5 125.7 11.6
 MET-139   LEU-140  1.5 1.6 2.6 3.0 79.3 76.1 3.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-164   GLN-165  3.3 3.3 -0.4 1.1 56.4 54.8 21.9
 GLN-165   TYR-166  3.9 4.1 -4.0 -4.9 28.0 32.8 46.5
 TYR-166   TYR-167  2.3 2.4 9.8 -13.9 78.2 80.1 60.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-169   VAL-170  6.1 5.9 6.6 -11.8 164.8 161.1 71.8
 VAL-170   ILE-171  6.0 5.8 7.9 -3.8 120.3 114.0 41.4
 ILE-171   PRO-172  8.6 8.7 4.3 -4.7 168.7 166.2 23.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-173   LEU-174  10.1 10.4 2.8 8.3 32.6 32.7 17.2
 LEU-174   GLU-175  10.3 10.5 -8.7 20.4 105.8 108.7 99.0
 GLU-175   VAL-176  10.2 10.5 -4.7 6.3 163.8 160.3 13.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-185   LYS-186  7.0 7.1 -3.4 -1.8 83.3 85.0 4.5
 LYS-186   VAL-187  10.7 10.8 10.2 3.8 47.0 38.8 97.2
 VAL-187   ASP-188  10.6 10.4 -1.6 -9.5 101.5 96.1 -51.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-189   ALA-190  6.4 6.5 1.9 -1.2 124.6 120.1 -41.3
 ALA-190   VAL-191  6.5 6.4 -7.6 17.5 66.6 70.6 -36.7
 VAL-191   VAL-192  5.4 5.8 -10.0 -1.2 17.7 15.4 51.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-200   PRO-201  4.3 3.3 14.2 3.9 54.1 60.2 120.5
 PRO-201   HIS-202  5.1 4.8 0.1 7.9 53.4 48.2 71.6
 HIS-202   PRO-203  2.7 3.0 3.4 6.0 89.9 84.2 -10.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees