Asp/glu-Specific Dipeptidyl-Peptidase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-293   ASP-294  6.3 5.8 -18.2 5.6 132.4 130.2 -49.2
 ASP-294   ASN-295  3.7 3.9 13.1 16.8 13.7 10.9 166.3
 ASN-295   ASN-296  4.1 3.5 -17.8 -13.6 105.7 111.7 -67.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-309   LEU-310  18.8 18.7 0.6 -14.0 167.4 171.4 71.2
 LEU-310   ARG-311  17.1 17.3 4.8 -4.2 123.4 120.2 -18.9
 ARG-311   GLU-312  20.1 20.3 0.5 17.9 102.0 99.2 0.1
 GLU-312   MET-313  22.5 22.6 -30.0 -35.3 125.8 141.4 -271.9
 GLU-312   MET-313  22.5 22.6 -30.0 -35.3 125.8 141.4 -271.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-312   MET-313  22.5 22.6 -30.0 -35.3 125.8 141.4 -271.9
 GLU-312   MET-313  22.5 22.6 -30.0 -35.3 125.8 141.4 -271.9
 MET-313   LEU-314  20.5 21.6 53.0 17.0 17.0 41.1 368.9
 LEU-314   ALA-315  20.2 19.7 -64.2 64.2 104.9 127.7 -31.5
 ALA-315   ASP-316  24.0 23.4 -9.1 33.9 86.3 76.8 42.0
 ALA-315   ASP-316  24.0 23.4 -9.1 33.9 86.3 76.8 42.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-315   ASP-316  24.0 23.4 -9.1 33.9 86.3 76.8 42.0
 ALA-315   ASP-316  24.0 23.4 -9.1 33.9 86.3 76.8 42.0
 ASP-316   PRO-317  25.3 24.5 41.8 -19.6 89.9 103.7 47.5
 ASN-320   ILE-321  20.9 20.9 -23.0 9.7 89.2 61.9 -33.0
 ASN-320   ILE-321  20.9 20.9 -23.0 9.7 89.2 61.9 -33.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-320   ILE-321  20.9 20.9 -23.0 9.7 89.2 61.9 -33.0
 ASN-320   ILE-321  20.9 20.9 -23.0 9.7 89.2 61.9 -33.0
 ILE-321   MET-322  22.4 22.4 -13.5 51.5 20.7 32.8 -178.9
 MET-322   TYR-323  22.9 24.0 15.7 -80.6 130.6 132.7 232.9
 TYR-323   ALA-324  20.3 20.6 41.5 -31.4 71.6 65.2 -17.5
 ALA-324   ALA-325  17.6 17.6 16.6 -2.5 131.3 131.8 -43.1
 ALA-325   LYS-326  17.2 17.6 8.8 2.8 144.4 144.9 -41.7
 LYS-326   TYR-327  16.8 17.2 -17.9 5.1 100.0 98.4 8.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-331   ASN-332  8.7 8.6 -16.2 7.7 83.2 79.3 25.8
 ASN-332   GLY-333  7.2 7.6 -2.7 3.6 31.6 31.9 9.0
 GLY-333   TYR-334  6.4 6.7 -8.6 7.1 87.1 91.8 0.6
 TYR-334   LYS-335  6.0 6.0 1.5 -4.9 113.3 112.0 -1.5
 TYR-334   LYS-335  6.0 6.0 1.5 -4.9 113.3 112.0 -1.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-334   LYS-335  6.0 6.0 1.5 -4.9 113.3 112.0 -1.5
 TYR-334   LYS-335  6.0 6.0 1.5 -4.9 113.3 112.0 -1.5
 LYS-335   ARG-336  3.1 3.0 -6.6 15.6 121.8 123.6 31.7
 ARG-336   ALA-337  1.4 2.2 -9.8 8.4 136.4 130.9 -12.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-338   GLY-339  4.4 3.4 -17.7 12.0 109.6 98.1 -5.8
 GLY-339   ALA-340  3.5 3.1 -12.2 10.8 30.9 30.8 -3.1
 ALA-340   ASN-341  3.7 3.7 -6.2 6.5 70.9 75.8 8.0
 ASN-341   TRP-342  6.3 5.7 -7.9 4.5 121.4 119.8 -28.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-383   GLU-384  2.8 2.4 -3.3 -2.7 77.6 80.5 12.6
 GLU-384   GLY-385  5.9 5.6 16.0 -24.8 114.7 115.9 21.0
 GLY-385   ARG-386  5.0 4.8 -3.3 22.5 124.3 117.6 41.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-540   ALA-541  8.9 9.1 -13.8 4.1 147.7 139.5 -49.8
 ALA-541   PHE-542  7.1 6.8 -5.7 5.7 79.7 69.6 18.6
 PHE-542   ASP-543  4.1 4.0 -36.2 1.3 56.3 57.4 103.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees