Ump-Cmp Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-133   ARG-134  10.9 10.9 -10.1 2.3 74.7 85.2 11.1
 ARG-134   GLY-135  10.7 11.0 10.4 0.3 70.0 62.9 44.6
 GLY-135   LYS-136  13.7 13.8 30.7 -12.1 128.5 123.1 -31.6
 LYS-136   SER-137  15.8 16.2 20.9 -55.2 146.8 109.8 111.4
 SER-137   SER-138  15.0 16.4 -13.6 71.4 89.9 119.8 135.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-155   LEU-156  3.0 3.1 -0.6 -7.0 87.9 58.5 -4.5
 LEU-156   GLN-157  2.8 1.7 4.5 -25.8 159.9 154.4 72.1
 GLN-157   SER-158  2.8 2.2 3.9 -32.2 106.1 94.3 35.2
 SER-158   THR-159  5.0 5.7 -16.7 20.4 115.0 132.9 39.2
 THR-159   LYS-160  7.3 7.1 -26.0 -4.3 86.4 97.8 -14.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees