Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-620   MET-621  13.2 13.0 11.2 -4.4 61.9 64.7 -194.3
 MET-621   ALA-622  13.7 13.6 -12.8 17.1 131.9 133.5 219.9
 ALA-622   ASP-623  10.5 10.4 -16.2 8.3 79.0 76.7 22.2
 ASP-623   THR-624  8.7 9.2 2.1 7.1 103.0 102.3 -176.2
 THR-624   PHE-625  4.9 5.4 5.6 -8.3 114.1 116.3 205.3
 PHE-625   LEU-626  3.9 4.0 3.8 -9.0 130.6 130.0 163.3
 PHE-625   LEU-626  3.9 4.0 3.8 -9.0 130.6 130.0 163.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-625   LEU-626  3.9 4.0 3.8 -9.0 130.6 130.0 163.3
 PHE-625   LEU-626  3.9 4.0 3.8 -9.0 130.6 130.0 163.3
 LEU-626   GLU-627  4.8 5.0 5.8 -7.0 102.9 100.2 -23.3
 GLU-627   HIS-628  7.4 7.7 10.4 -8.3 45.0 38.0 118.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-709   ALA-710  17.1 17.0 -1.9 8.2 95.5 93.9 24.1
 ALA-710   LEU-711  15.9 16.1 -11.9 6.2 70.0 65.5 21.6
 LEU-711   ASP-712  16.8 17.0 -10.3 17.4 126.8 128.0 82.4
 ASP-712   THR-713  18.0 18.3 -12.9 6.6 66.0 65.1 300.7
 THR-713   LYS-714  19.1 19.0 -16.5 -5.1 117.4 117.7 -382.4
 LYS-714   GLY-715  22.5 22.4 1.9 -3.8 68.7 84.6 -114.4
 GLY-715   PRO-716  21.4 21.6 -6.0 -2.6 82.1 87.6 255.8
 PRO-716   GLU-717  23.9 24.1 -9.8 12.9 126.2 136.4 163.8
 GLU-717   ILE-718  27.3 27.5 16.4 -6.9 96.6 94.0 16.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-811   GLY-812  28.0 27.7 15.4 4.0 92.6 98.1 33.1
 GLY-812   ALA-813  26.8 26.9 -7.9 -14.0 146.6 144.5 -662.2
 ALA-813   ALA-814  27.9 27.6 20.7 -11.8 55.0 51.1 1001.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-817   PRO-818  25.6 25.4 -11.7 -2.4 69.9 66.1 286.9
 PRO-818   ALA-819  22.6 22.7 -0.1 1.5 120.8 119.4 -125.8
 ALA-819   VAL-820  19.2 19.2 2.4 -6.0 107.5 102.1 -288.8
 VAL-820   SER-821  19.3 19.6 6.8 -12.0 119.9 117.4 192.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-837   MET-838  12.1 12.3 -3.8 -10.7 118.0 114.6 -146.9
 MET-838   VAL-839  11.0 11.2 1.2 -2.4 99.0 90.9 270.9
 VAL-839   PHE-840  12.4 12.5 -3.3 0.0 151.8 150.1 -146.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-850   HIS-851  12.0 12.1 4.0 2.4 21.3 24.0 39.0
 HIS-851   GLU-852  11.8 11.7 -5.0 7.5 137.5 137.0 15.8
 GLU-852   VAL-853  14.1 14.0 -8.5 0.5 101.0 99.3 158.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-862   ASN-863  3.4 3.6 1.0 3.4 43.1 40.2 390.6
 ASN-863   ILE-864  4.8 5.0 -21.0 12.9 128.8 132.0 -104.9
 ILE-864   LYS-865  7.1 7.5 -7.5 6.6 151.0 142.1 -183.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-874   GLY-875  20.6 20.3 -0.3 1.3 96.1 92.1 219.8
 GLY-875   VAL-876  17.2 16.9 7.9 -8.2 147.9 141.4 -82.3
 VAL-876   ARG-877  16.5 16.3 -18.0 12.4 85.6 84.8 -105.4
 ARG-877   ARG-878  18.0 18.1 10.6 -15.6 47.4 48.4 1.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-879   ASP-880  13.1 13.0 4.9 -1.9 73.4 71.4 -148.1
 ASP-880   GLU-881  11.8 11.8 1.6 3.3 10.7 9.2 218.9
 GLU-881   ILE-882  12.8 12.9 15.1 -20.5 63.2 57.7 -178.7
 ILE-882   LEU-883  11.6 11.4 3.6 -7.4 85.1 86.3 -150.3
 ILE-882   LEU-883  11.6 11.4 3.6 -7.4 85.1 86.3 -150.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-882   LEU-883  11.6 11.4 3.6 -7.4 85.1 86.3 -150.3
 ILE-882   LEU-883  11.6 11.4 3.6 -7.4 85.1 86.3 -150.3
 LEU-883   GLU-884  8.2 7.9 7.9 -6.0 129.8 127.5 -71.0
 GLU-884   ALA-885  8.1 8.0 6.8 -16.0 160.7 161.3 316.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-890   VAL-891  12.2 12.1 8.8 -12.5 127.8 132.6 -72.1
 VAL-891   ALA-892  13.8 14.0 2.2 -8.7 84.3 83.1 154.2
 ALA-892   ARG-893  17.5 17.5 -1.2 9.7 42.7 39.7 -130.5
 ARG-893   GLY-894  19.2 19.0 -5.6 -6.9 97.2 100.6 -87.4
 GLY-894   ASP-895  22.7 22.3 -6.8 8.6 95.4 106.8 244.5
 ASP-895   LEU-896  23.3 22.9 9.3 -6.8 129.1 125.6 -7.5
 LEU-896   GLY-897  20.9 20.9 0.4 12.1 147.4 141.7 -398.0
 GLY-897   ILE-898  22.9 23.1 -4.2 1.5 99.6 98.0 185.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-899   ILE-900  25.1 25.1 14.7 -6.5 148.2 147.2 -325.9
 ILE-900   PRO-901  23.8 23.6 -3.9 -5.6 37.3 41.7 375.7
 PRO-901   ALA-902  24.7 24.6 4.3 0.1 101.5 103.4 -174.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-913   GLY-914  6.7 6.7 -0.4 5.2 103.4 103.5 110.3
 GLY-914   ARG-915  4.3 4.4 -9.0 20.2 42.1 40.5 -270.9
 ARG-915   CYS-916  5.4 5.7 -14.3 4.9 38.2 42.2 308.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-918   ALA-919  2.9 2.8 3.0 -4.7 22.1 27.1 -240.5
 ALA-919   GLY-920  3.2 3.4 4.1 0.2 62.9 55.0 194.3
 GLY-920   LYS-921  2.0 2.0 -3.0 -5.8 141.2 138.2 -195.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-951   LEU-952  11.7 11.5 -8.4 8.4 126.0 127.3 -39.9
 LEU-952   ASP-953  9.5 9.5 3.5 -14.5 106.5 105.0 477.2
 ASP-953   GLY-954  7.6 7.7 20.7 -24.3 132.2 137.7 -102.4
 GLY-954   ALA-955  6.4 6.7 22.5 -16.4 154.2 157.0 42.7
 ALA-955   ASP-956  8.9 8.9 9.2 2.9 122.5 125.5 -491.9
 ASP-956   CYS-957  9.2 9.1 -3.0 -13.6 77.7 79.7 38.9
 CYS-957   ILE-958  12.6 12.4 -3.1 8.4 119.1 107.6 13.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-986   ALA-987  15.4 15.2 17.9 -16.5 45.9 35.6 70.1
 ALA-987   MET-988  13.1 13.0 8.3 -5.7 103.8 100.1 221.6
 MET-988   PHE-989  10.0 9.7 14.0 -19.0 55.6 58.4 43.1
 PHE-989   HIS-990  8.1 8.2 13.2 -3.1 128.5 130.4 -223.8
 HIS-990   ARG-991  9.4 9.6 -13.4 19.7 101.6 102.3 1.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-1029   LEU-1030  18.2 18.3 3.0 0.0 162.5 166.2 -4.8
 LEU-1030   THR-1031  19.0 19.0 8.0 -8.6 114.0 112.9 119.7
 THR-1031   GLU-1032  15.6 15.7 -3.7 6.5 35.6 40.3 184.2
 GLU-1032   SER-1033  14.1 14.0 2.9 6.9 88.9 91.6 27.8
 GLU-1032   SER-1033  14.1 14.0 2.9 6.9 88.9 91.6 27.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-1032   SER-1033  14.1 14.0 2.9 6.9 88.9 91.6 27.8
 GLU-1032   SER-1033  14.1 14.0 2.9 6.9 88.9 91.6 27.8
 SER-1033   GLY-1034  10.6 10.3 -13.6 6.4 30.9 35.4 210.8
 GLY-1034   ARG-1035  10.9 10.7 -16.6 14.7 51.5 47.7 -88.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-1055   HIS-1056  15.4 15.4 5.2 6.3 56.9 57.4 215.1
 HIS-1056   GLN-1057  16.3 16.3 -19.1 19.0 110.9 116.4 2.8
 GLN-1057   THR-1058  13.1 13.0 -0.5 -0.3 146.2 146.2 -337.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-1071   VAL-1072  20.8 20.8 7.4 -16.1 20.5 16.1 -233.1
 VAL-1072   CYS-1073  21.0 21.0 -5.2 4.9 105.9 113.6 46.2
 CYS-1073   LYS-1074  23.0 23.0 4.8 0.8 17.5 13.4 529.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees