Glutamate Receptor 3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-109   GLY-110  4.1 4.1 5.2 -3.4 48.2 52.1 118.5
 GLY-110   ILE-111  5.3 5.2 6.1 -2.4 113.8 113.7 -18.0
 ILE-111   SER-112  8.4 8.4 -1.6 -1.1 107.8 107.2 14.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-215   ASP-216  8.9 9.1 4.4 -4.1 105.9 105.9 -131.3
 ASP-216   SER-217  5.2 5.4 5.5 -7.0 66.0 64.2 3.9
 SER-217   LYS-218  2.0 2.1 4.1 -2.1 63.6 65.0 -9.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-250   LYS-251  12.4 12.5 3.9 -7.8 67.8 67.1 -80.7
 LYS-251   ASN-252  11.4 11.6 12.2 -5.4 101.5 99.7 29.0
 ASN-252   LYS-253  15.1 15.3 0.0 -1.6 16.5 18.6 65.2
 LYS-253   TRP-254  14.8 14.8 1.2 -3.3 106.8 106.0 38.9
 TRP-254   TRP-255  12.0 12.1 2.1 -1.2 56.4 55.6 -46.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees