Glutamate Receptor Subunit 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-106   MET-107  8.8 8.8 -2.4 -2.5 100.4 98.6 -27.6
 MET-107   SER-108  5.3 5.3 -5.3 6.2 46.2 49.2 11.2
 SER-108   LEU-109  3.7 3.9 2.1 3.0 64.7 64.6 144.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-113   MET-114  15.7 15.6 -0.5 -0.8 37.4 36.4 123.3
 MET-114   ILE-115  15.6 15.5 -5.6 12.1 69.9 70.5 -159.6
 ILE-115   LYS-116  18.7 18.8 2.9 16.7 146.9 153.1 -818.4
 LYS-116   LYS-117  19.8 19.9 144.7 -154.3 67.9 81.5 356.1
 LYS-117   GLY-118  20.7 21.1 -14.0 5.1 94.3 88.5 503.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-135   GLY-136  23.4 23.4 -0.4 -3.6 96.4 95.7 15.3
 GLY-136   THR-137  22.1 22.0 0.5 -0.4 83.6 85.8 122.3
 THR-137   LEU-138  19.4 19.3 5.1 -1.1 136.1 135.5 -138.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-141   SER-142  18.6 18.1 -18.3 6.6 15.1 15.0 461.0
 SER-142   THR-143  17.1 16.9 4.8 -1.0 103.8 102.4 18.0
 THR-143   LYS-144  16.8 16.5 -1.4 -0.4 82.7 83.5 -0.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-169   PHE-170  25.4 25.3 6.1 -5.8 89.6 88.0 -16.8
 PHE-170   VAL-171  23.4 23.3 1.1 -4.6 159.2 157.2 157.4
 VAL-171   ARG-172  21.1 20.9 -26.0 14.3 87.0 88.5 94.8
 ARG-172   THR-173  20.3 20.5 13.6 -1.7 85.7 98.8 -261.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-192   GLU-193  13.3 13.3 5.0 -0.6 55.7 54.7 19.4
 GLU-193   SER-194  9.9 10.0 -9.2 1.1 75.2 78.0 252.3
 SER-194   THR-195  7.7 7.8 -6.8 -7.0 45.0 47.9 666.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-197   GLU-198  9.4 9.3 2.9 4.2 79.5 77.3 200.6
 GLU-198   TYR-199  7.5 7.4 -7.0 4.1 155.3 158.1 -158.1
 TYR-199   ILE-200  5.6 5.5 1.1 4.2 46.2 48.6 144.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-207   THR-208  17.1 17.1 2.1 6.0 36.0 34.6 131.1
 THR-208   MET-209  15.8 15.8 2.4 7.1 42.3 38.2 729.6
 MET-209   LYS-210  15.0 15.3 -8.4 -9.3 143.0 138.2 -916.7
 LYS-210   VAL-211  13.7 13.7 2.0 -4.5 46.8 44.5 -19.8
 VAL-211   GLY-212  16.3 16.1 5.2 0.5 27.7 28.4 127.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-216   SER-217  10.9 11.1 8.9 -6.9 104.6 103.7 -13.3
 SER-217   LYS-218  7.6 8.0 4.4 4.4 98.0 100.7 122.7
 LYS-218   GLY-219  8.4 8.9 -3.6 2.2 49.9 58.6 40.3
 GLY-219   TYR-220  8.1 8.3 -3.9 -5.8 45.9 42.6 176.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-256   ASP-257  7.4 7.4 10.2 -3.2 42.4 46.0 286.6
 ASP-257   LYS-258  8.8 8.9 -4.6 -3.2 147.9 150.0 -349.1
 LYS-258   GLY-259  6.3 6.4 18.0 -16.2 92.7 92.3 96.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees