Glutamate Receptor 3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-109   GLY-110  1.9 1.9 5.2 -27.5 109.3 110.6 65.9
 GLY-110   ILE-111  3.9 3.9 7.4 1.6 36.5 36.2 33.8
 ILE-111   SER-112  7.0 7.0 -6.9 4.9 120.8 117.3 -55.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-194   THR-195  2.2 2.0 -1.6 -1.3 65.4 64.3 13.8
 THR-195   MET-196  3.3 3.2 4.6 -4.1 157.0 157.9 -4.6
 MET-196   ASN-197  5.0 4.7 -1.7 0.0 52.6 51.9 -3.7
 ASN-197   GLU-198  2.5 2.3 -6.9 -5.5 71.9 70.2 68.6
 GLU-198   TYR-199  1.6 1.5 16.1 -8.6 132.8 124.9 -53.9
 TYR-199   ILE-200  4.4 4.0 -2.1 4.6 22.2 20.0 7.7
 ILE-200   GLU-201  3.0 2.7 5.2 -4.0 115.9 115.6 -28.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-207   THR-208  4.0 4.0 -0.1 2.3 145.9 148.4 47.6
 THR-208   MET-209  4.4 4.4 -0.9 2.5 130.7 129.1 68.5
 MET-209   LYS-210  5.3 5.9 -18.1 -5.5 150.1 155.3 -137.2
 LYS-210   VAL-211  5.6 5.7 1.1 -13.2 102.0 108.7 -0.9
 LYS-210   VAL-211  5.6 5.7 1.1 -13.2 102.0 108.7 -0.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-210   VAL-211  5.6 5.7 1.1 -13.2 102.0 108.7 -0.9
 LYS-210   VAL-211  5.6 5.7 1.1 -13.2 102.0 108.7 -0.9
 VAL-211   GLY-212  9.2 9.1 6.3 3.8 161.8 158.8 -59.0
 GLY-212   GLY-213  10.8 10.5 -12.6 0.6 46.5 47.1 60.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-215   ASP-216  9.3 8.9 -2.8 -0.9 155.4 151.5 -6.3
 ASP-216   SER-217  7.1 6.9 1.7 8.6 89.3 88.6 -29.6
 SER-217   LYS-218  3.5 3.4 6.9 17.2 62.9 76.4 109.4
 LYS-218   GLY-219  3.8 4.5 -18.7 -11.4 67.8 82.3 34.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-254   TRP-255  12.4 12.2 -3.5 2.9 107.5 111.1 -13.8
 TRP-255   TYR-256  9.0 8.9 0.4 9.2 52.7 51.2 61.3
 TYR-256   ASP-257  10.5 10.5 -7.3 -7.6 124.1 125.3 -36.5
 ASP-257   LYS-258  14.1 13.9 9.3 10.8 9.7 39.0 149.8
 LYS-258   GLY-259  13.0 12.6 -17.7 -9.0 104.9 112.8 -60.3
 GLY-259   GLU-260  9.6 9.4 22.0 -24.4 14.4 4.6 -45.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees