Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-519
THR-520
6.1
6.4
-13.0
-1.1
40.5
35.9
35.9
THR-520
LEU-521
3.6
4.6
-26.6
22.8
117.3
110.8
-8.8
LEU-521
GLY-522
1.4
2.2
-13.5
-3.1
40.1
44.3
45.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-742
LEU-743
12.4
12.2
4.3
6.5
72.7
71.2
22.0
LEU-743
ILE-744
8.9
8.8
-2.5
9.8
162.0
148.8
28.9
ILE-744
ASP-745
9.2
9.3
-23.5
17.8
127.6
131.5
-18.6
ASP-745
SER-746
5.6
5.7
10.3
-2.4
122.3
113.7
-4.7
SER-746
LYS-747
2.8
2.8
2.6
10.3
73.2
81.8
38.7
LYS-747
GLY-748
1.1
1.3
-15.7
4.4
36.7
44.3
26.0
GLY-748
TYR-749
4.2
4.6
-9.5
2.4
69.6
68.4
7.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees