Dpo4 Polymerase IV
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-232
TYR-233
11.1
11.6
-38.4
49.6
136.8
133.7
26.2
GLU-232
TYR-233
24.9
23.9
-38.4
49.6
65.8
69.7
-2.0
TYR-233
ASN-234
21.4
20.5
22.4
1.2
37.0
44.4
15.1
GLU-232
TYR-233
11.1
11.6
-38.4
49.6
136.8
133.7
26.2
GLU-232
TYR-233
24.9
23.9
-38.4
49.6
65.8
69.7
-2.0
TYR-233
ASN-234
21.4
20.5
22.4
1.2
37.0
44.4
15.1
ASN-234
GLU-235
19.0
17.8
-6.5
30.0
71.7
65.0
-6.3
GLU-235
PRO-236
16.5
14.8
-41.1
19.1
105.2
127.4
-1.4
PRO-236
ILE-237
13.2
12.1
-11.1
8.4
89.0
83.6
1.4
ILE-237
ARG-238
9.8
8.8
13.7
-31.4
105.1
99.0
17.7
ARG-238
THR-239
7.7
6.0
1.0
-8.9
116.9
143.3
-0.1
THR-239
ARG-240
4.1
3.2
-33.3
-27.6
11.5
37.3
50.4
ARG-240
VAL-241
3.6
4.0
-59.6
-156.7
62.4
41.6
-84.6
VAL-241
ARG-242
1.3
2.6
-100.7
-26.6
30.1
24.7
93.6
ARG-242
LYS-243
1.4
2.7
-17.0
8.4
33.8
46.7
3.2
LYS-243
SER-244
0.7
1.9
43.8
-72.8
127.0
141.6
15.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees