Redox-Sensing Transcriptional Repressor Rex

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-78   VAL-79  2.5 3.7 10.5 -13.7 77.3 86.9 -3.5
 VAL-79   LYS-80  2.1 2.5 4.6 24.2 112.5 109.2 -36.3
 LYS-80   LYS-81  2.9 1.9 -17.6 -34.9 0.5 19.1 156.6

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees