5-Methyltetrahydropteroyltriglutamate--Homocysteine Methyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-400   ILE-401  14.6 14.0 4.4 -2.9 96.8 102.9 3.2
 ILE-401   THR-402  11.2 10.9 14.6 -19.5 147.7 164.9 123.1
 THR-402   ASN-403  10.9 11.5 8.7 -9.9 101.3 101.5 28.4
 ASN-403   ASP-404  11.6 12.7 -29.0 18.1 133.7 137.8 -51.6
 ASP-404   PRO-405  10.9 11.8 20.7 -13.5 117.7 116.2 -11.4
 PRO-405   LYS-406  13.9 14.9 9.6 -4.7 89.6 92.8 -61.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-407   GLN-408  10.6 11.1 12.6 -1.8 149.1 146.9 -81.4
 GLN-408   GLU-409  12.4 13.4 2.6 -10.4 106.0 101.5 64.7
 GLU-409   ARG-410  15.4 16.2 18.4 -16.4 104.9 110.9 -35.7
 ARG-410   LEU-411  14.0 14.2 -10.9 -3.0 22.4 15.0 99.4
 LEU-411   THR-412  12.4 12.8 -4.2 20.2 51.4 55.2 -90.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-503   ASP-504  16.7 17.0 59.0 -21.1 6.0 29.0 266.8
 ASP-504   MET-505  15.4 15.0 -3.6 -13.0 101.4 110.2 -11.7
 MET-505   VAL-506  13.9 13.3 -7.6 1.4 100.7 92.4 -11.9
 VAL-506   GLN-507  10.6 9.9 -9.1 5.6 34.9 28.6 47.8
 GLN-507   TYR-508  10.9 9.8 9.2 -5.9 143.6 134.8 -45.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-509   GLY-510  7.7 7.4 -10.1 17.6 95.0 97.2 39.2
 GLY-510   GLU-511  6.1 5.1 -13.4 6.3 165.7 161.5 -24.6
 GLU-511   GLN-512  6.8 5.6 -9.9 15.6 116.7 116.8 23.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-513   ASN-514  2.0 1.6 8.9 -15.5 100.7 101.8 29.2
 ASN-514   GLY-515  1.8 2.3 4.2 -4.1 22.2 25.8 -18.3
 GLY-515   PHE-516  3.9 4.4 14.7 -11.9 76.5 75.5 15.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-537   VAL-538  6.1 6.1 -1.4 11.9 93.9 94.9 17.7
 VAL-538   GLY-539  8.3 8.5 -12.5 3.1 97.1 89.5 -6.9
 GLY-539   ASP-540  7.4 7.9 -12.3 17.2 77.7 76.4 -21.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-570   VAL-571  6.4 5.8 -4.7 3.7 131.0 130.5 -7.6
 VAL-571   THR-572  5.8 5.3 -2.3 1.9 73.0 72.8 -11.7
 THR-572   ILE-573  8.4 8.0 -2.9 -0.4 40.3 39.7 17.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-577   PHE-578  8.4 8.2 0.2 -1.4 123.3 121.9 -13.4
 PHE-578   PRO-579  9.7 9.7 9.3 -10.5 89.8 87.9 11.0
 PRO-579   ARG-580  7.3 7.2 -0.7 -1.8 102.1 99.0 23.1
 ARG-580   ASP-581  8.4 8.7 -8.2 -24.0 44.1 23.5 181.9
 ASP-581   ASP-582  11.8 11.3 47.0 -31.3 111.6 96.2 -105.1
 ASP-582   VAL-583  12.1 12.4 29.7 -15.1 133.5 107.6 -85.6
 VAL-583   SER-584  9.3 9.7 -10.2 6.2 50.5 53.8 -41.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-591   LEU-592  5.8 6.0 2.3 -5.9 66.4 66.9 3.3
 LEU-592   GLY-593  4.7 4.3 6.2 -2.6 96.3 97.5 21.2
 GLY-593   LEU-594  8.1 7.7 12.0 -9.3 44.0 47.0 41.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-616   ALA-617  13.7 13.8 -13.7 -4.2 123.4 124.1 -84.3
 ALA-617   ILE-618  10.7 10.8 6.6 2.2 43.5 46.0 39.6
 ILE-618   ARG-619  9.4 9.2 -12.6 18.8 155.9 148.9 62.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-633   LEU-634  2.7 2.3 -0.5 -6.4 91.8 95.6 -10.2
 LEU-634   ASN-635  6.1 5.7 11.8 1.0 59.3 67.0 53.0
 ASN-635   TRP-636  8.1 7.5 9.4 -8.5 8.7 13.0 -7.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees