Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-718   ARG-719  10.2 10.2 -3.9 6.1 134.0 137.7 94.9
 ARG-719   THR-720  10.5 10.5 -1.5 5.9 151.7 149.0 5.8
 THR-720   GLY-721  9.1 9.0 -4.3 1.3 129.5 127.8 -25.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-764   LYS-765  13.4 13.6 7.2 -24.8 35.2 35.2 -156.2
 LYS-765   VAL-766  15.4 15.4 22.3 -12.1 42.9 36.3 25.0
 VAL-766   VAL-767  12.3 12.4 12.5 -26.4 99.2 102.3 56.1
 VAL-767   ASP-768  10.5 11.0 -6.9 -8.2 74.6 67.3 65.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-802   GLY-803  6.9 6.6 9.8 -29.1 111.5 111.6 128.1
 GLY-803   SER-804  9.9 9.4 13.3 -16.6 79.0 82.3 -47.2
 SER-804   LYS-805  10.9 11.1 -11.9 6.4 162.3 152.9 2.5
 LYS-805   LYS-806  11.6 12.1 2.6 -1.2 40.0 43.8 -3.4
 LYS-806   GLY-807  9.4 9.5 -2.0 -4.3 138.7 143.7 -66.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-810   PRO-811  3.8 3.7 -4.2 -1.0 148.3 146.0 -141.4
 PRO-811   GLY-812  2.6 2.6 4.6 9.2 70.5 71.3 125.2
 GLY-812   ALA-813  5.4 5.5 -30.7 15.3 81.4 90.0 8.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-814   VAL-815  10.0 9.6 -2.9 10.2 125.7 120.7 115.3
 VAL-815   ASP-816  10.8 10.5 0.3 17.3 112.1 114.9 -51.2
 ASP-816   LEU-817  14.5 14.3 -36.1 25.8 106.0 90.2 -58.5
 LEU-817   PRO-818  14.7 14.4 -12.6 5.3 33.8 39.0 84.8
 PRO-818   ALA-819  17.3 17.4 -22.8 13.5 56.0 54.3 -35.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees